Installing SWMF cd Library/src; cat precision.h mpif90.h > mpif.h touch Library/src/Makefile.DEPEND Library/src/Makefile.RULES touch DATAREAD/srcIndices/Makefile.DEPEND EMPIRICAL/srcEE/Makefile.DEPEND EMPIRICAL/srcIE/Makefile.DEPEND EMPIRICAL/srcUA/Makefile.RULES NOMPI/src/Makefile.RULES CRASH/src/Makefile.DEPEND VERSION 2.3 cd CON; make install make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON' touch Control/src/Makefile.DEPEND Control/src/Makefile.RULES Library/src/Makefile.DEPEND Coupler/src/Makefile.DEPEND Interface/src/Makefile.DEPEND Stubs/src/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON' cd ESMF/ESMF_SWMF; make install make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/ESMF/ESMF_SWMF' touch src/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/ESMF/ESMF_SWMF' if([ -d "GM/BATSRUS" ]); then \ if([ -d "SC/BATSRUS" ]); \ then cp GM/BATSRUS/Config.pl SC/BATSRUS; \ perl -i -pe 's/GM/SC/' SC/BATSRUS/Config.pl; \ fi; \ if([ -d "OH/BATSRUS" ]); \ then cp GM/BATSRUS/Config.pl OH/BATSRUS; \ perl -i -pe 's/GM/OH/' OH/BATSRUS/Config.pl; \ fi; \ if([ -d "IH/BATSRUS" ]); \ then cp GM/BATSRUS/Config.pl IH/BATSRUS; \ perl -i -pe 's/GM/IH/' IH/BATSRUS/Config.pl; \ fi; \ if([ -d "IH/BATSRUS_share" ]); \ then cp GM/BATSRUS/Config.pl IH/BATSRUS_share; \ perl -i -pe "s/GM/IH/; s#'src#'../../GM/BATSRUS/src#" \ IH/BATSRUS_share/Config.pl; \ fi; \ fi for i in `ls -d [A-Z][A-Z]/*/ | grep -v /CVS/ | grep -v /Empty/`; \ do (if([ -f "$i/Config.pl" ]); then \ echo Installing $i; cd $i; ./Config.pl -install=c; \ fi); \ done Installing GM/BATSRUS/ Installing BATSRUS as a GM component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cp -f src/ModSize_orig.f90 src/ModSize.f90 touch src/Makefile.DEPEND src/Makefile.RULES srcInterface/Makefile.DEPEND srcPostProc/Makefile.RULES ./Config.pl -u=Default -e=Mhd grep: src/ModAdvance.f90: No such file or directory cd src; make STATIC make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make -s STATIC1 NAME=Advance make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make -s STATIC1 NAME=Nodes make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make -s STATIC1 NAME=Geometry make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make -s STATIC1 NAME=Raytrace #^CFG IF RAYTRACE make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make -s STATIC1 NAME=CT #^CFG IF CONSTRAINB make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' Installing IE/Ridley_serial/ Installing Ridley_serial as a IE component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' cp -f src/ModSize_orig.f90 src/ModSize.f90 touch src/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' Installing IE/RIM/ Installing RIM as a IE component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM' touch src/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM' Installing IH/BATSRUS/ Installing BATSRUS as a IH component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS' make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS' Installing IH/BATSRUS_share/ Installing BATSRUS as a IH component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS_share' touch src/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS_share' Installing IM/HEIDI/ Installing HEIDI as a IM component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' touch src/Makefile.DEPEND src/Makefile.RULES srcInterface/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' Installing IM/RCM/ Installing RCM as a IM component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM' touch src/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM' Installing IM/RCM2/ Installing RCM2 as a IM component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2' touch src/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2' Installing OH/BATSRUS/ Installing BATSRUS as a OH component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/BATSRUS' make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/BATSRUS' Installing PS/DGCPM/ Installing DGCPM as a PS component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/DGCPM' touch src/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/DGCPM' Installing PW/PWOM/ Installing PWOM as a PW component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' mkdir bin touch src/Makefile.DEPEND src/Makefile.RULES srcInterface/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' Installing RB/RBE/ Installing RBE as a RB component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' touch src/Makefile.DEPEND src/Makefile.RULES srcInterface/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' Installing RB/Rice/ Installing Rice as a RB component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Rice' touch srcInterface/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Rice' Installing RB/RiceV5/ Installing RiceV5 as a RB component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RiceV5' touch srcInterface/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RiceV5' Installing SC/BATSRUS/ Installing BATSRUS as a SC component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS' make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS' Installing SP/FLAMPA/ Installing FLAMPA as a SP component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/FLAMPA' mv Makefile.def Makefile.def.orig cp Makefile.def.orig Makefile.def touch src/Makefile.DEPEND srcInterface/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/FLAMPA' Installing SP/Kota/ Installing Kota as a SP component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Kota' touch src/Makefile.DEPEND srcInterface/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Kota' Installing UA/GITM/ Installing GITM as a UA component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM' touch src/Makefile.DEPEND touch srcIE/Makefile.DEPEND touch srcIO/Makefile.DEPEND make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM' Installing UA/GITM2/ Installing GITM2 as a UA component make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' cp src/ModSize.f90.orig src/ModSize.f90 touch src/Makefile.DEPEND src/Makefile.RULES srcInterface/Makefile.DEPEND cd src; make DYNAMIC make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' /nobackup/gtoth/Tmp/SWMF/share/Scripts/StaticToDynamic.pl -l=nBlocksMax -d=4 ModGITM_static.f90 > ModGITM.f90 /nobackup/gtoth/Tmp/SWMF/share/Scripts/StaticToDynamic.pl -l=nBlocksMax -d=4 ModEUV_static.f90 > ModEUV.f90 /nobackup/gtoth/Tmp/SWMF/share/Scripts/StaticToDynamic.pl -l=nBlocksMax -d=4 ModSources_static.f90 > ModSources.f90 # Replaces nBlocksMax with nBlocks to make allocation flexible perl -pi -e 's/nBlocksMax/nBlocks/ if /allocate/' \ ModGITM.f90 ModEUV.f90 ModSources.f90 make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' Configuring GITM for Earth!! Installation succeeded make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF' for i in `ls -d [A-Z][A-Z]/*/ | grep -v /CVS/ | grep -v /Empty/`; \ do ( cd $i; make test; ); done make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_shocktube_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Default -e=MhdHyp -g=256,4,4,10,1 Writing new grid size 256,4,4,10,1 into src/ModSize.f90... make make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 -132 lapack.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 -132 blas.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModBlasLapack.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModKind.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModNumConst.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModConst.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModCoordTransform.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModExactRS.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModFreq.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModInterpolate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModMpiConstants.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O0 -dusty ModMpiInterfaces.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModMpi.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModIoUnit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModLinearAdvection.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModLinearSolver.f90 f95 -DsysLinux -DcompNAGF95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModUtilities.F90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModReadParam.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModPlotFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModLookupTable.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModPlanetConst.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModSort.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModTimeConvert.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModTriangulate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_planet.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_geopack.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_axes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_line_extract.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_planet_field.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_ray_trace.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a lapack.o blas.o ModBlasLapack.o ModConst.o ModCoordTransform.o ModExactRS.o ModFreq.o ModInterpolate.o ModIoUnit.o ModKind.o ModLinearAdvection.o ModLinearSolver.o ModLookupTable.o ModMpiConstants.o ModMpiInterfaces.o ModMpi.o ModNumConst.o ModPlanetConst.o ModPlotFile.o ModReadParam.o ModSort.o ModTimeConvert.o ModTriangulate.o ModUtilities.o CON_axes.o CON_geopack.o CON_line_extract.o CON_planet.o CON_planet_field.o CON_ray_trace.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModTiming.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 timing_cpu.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 timing.f90 ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a ModTiming.o timing_cpu.o timing.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModMagnetogram.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a ModMagnetogram.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -c -w -r8 -O3 EEE_ModCommonVariables.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -c -w -r8 -O3 EEE_ModTD99.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -c -w -r8 -O3 EEE_ModGL98.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -c -w -r8 -O3 EEE_ModArch.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -c -w -r8 -O3 EEE_ModGetB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -c -w -r8 -O3 EEE_ModShearFlow.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -c -w -r8 -O3 EEE_ModGetStateInit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -c -w -r8 -O3 EEE_ModGetStateBC.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -c -w -r8 -O3 EEE_ModMain.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a EEE_ModCommonVariables.o EEE_ModTD99.o EEE_ModGL98.o EEE_ModArch.o EEE_ModShearFlow.o EEE_ModGetStateInit.o EEE_ModGetStateBC.o EEE_ModGetB0.o EEE_ModMain.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSingleFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExtraVariables.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModProcMH.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 load_balance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_faces.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_nodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 number_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 octree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 potential_force_averages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 refine_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_shocktube_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_shocktube] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_hallmhd_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Waves -e=Mhd -g=64,2,2,10,10 BATSRUS/Config.pl WARNING: nI=64 nJ=2 nK=2 does not allow AMR Writing new grid size 64,2,2,10,10 into src/ModSize.f90... make make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModNodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModOctree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPartSteady.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPolarNeighbor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCT.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRestartFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRaytrace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSatelliteFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSolarwind.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTimeStepControl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 BATS_methods.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 MH_set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-c -w -r8 -O3 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_hallmhd_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_hallmhd] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_multifluid_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Default -e=MhdHd -g=256,4,4,10,1 Writing new grid size 256,4,4,10,1 into src/ModSize.f90... make make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModNodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModOctree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_multifluid_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_multifluid] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_multiion_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Default -e=MultiIon -g=64,2,2,10,1 BATSRUS/Config.pl WARNING: nI=64 nJ=2 nK=2 does not allow AMR Writing new grid size 64,2,2,10,1 into src/ModSize.f90... make make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src 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-I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 refine_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_multiion_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_multiion] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_mhdions_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Default -e=MhdIons -g=64,2,2,40,1 BATSRUS/Config.pl WARNING: nI=64 nJ=2 nK=2 does not allow AMR Writing new grid size 64,2,2,40,1 into src/ModSize.f90... make make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModNodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModOctree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPartSteady.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPolarNeighbor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCT.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRestartFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRaytrace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSatelliteFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSolarwind.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTimeStepControl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 BATS_methods.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 MH_set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 advect_points.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 allocate_vars.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_criteria.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_gradients.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_timestep.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 coarsen_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 covariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 create_soln_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 exchange_messages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 explicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 find_neighbors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 fix_axis_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 load_balance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_faces.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_nodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 number_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 octree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 potential_force_averages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 refine_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_mhdions_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_mhdions] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_mhdnoncons_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Default -e=MhdNonCons -g=64,2,2,40,1 make make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModNodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPartSteady.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPolarNeighbor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCT.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRestartFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRaytrace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSatelliteFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSolarwind.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTimeStepControl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 BATS_methods.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 MH_set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 advect_points.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_mhdnoncons_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_mhdnoncons] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_eosgodunov_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -e=HdEos -u=Eos -g=400,2,2,10,1 BATSRUS/Config.pl WARNING: nI=400 nJ=2 nK=2 does not allow AMR Writing new grid size 400,2,2,10,1 into src/ModSize.f90... make CRASH make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd /nobackup/gtoth/Tmp/SWMF/util/CRASH/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModAtomicMass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModIonizPotential.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModExcitationData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModAtomicDataMix.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModPolyimide.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModExcitation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModFermiGas.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModPartition.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModStatSum.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModPowerLawEos.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModIonMix.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModOpacityVoigt.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModMultiGroup.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModTransport.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModEos.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a ModAtomicMass.o ModAtomicDataMix.o ModEos.o ModExcitation.o ModExcitationData.o ModPowerLawEos.o ModFermiGas.o ModIonizPotential.o ModPartition.o ModPolyimide.o ModStatSum.o ModTransport.o ModIonMix.o ModOpacityVoigt.o ModMultiGroup.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' /nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make CRASH make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/CRASH.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/CRASH.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE -lCRASH \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [CRASH_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/CRASH.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [CRASH] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [CRASH] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_eosgodunov_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_eosgodunov] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_levelset_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -e=HdCrash -u=Crash -g=4,4,2,2000,1 BATSRUS/Config.pl WARNING: nI=4 nJ=4 nK=2 does not allow AMR Writing new grid size 4,4,2,2000,1 into src/ModSize.f90... make CRASH make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd /nobackup/gtoth/Tmp/SWMF/util/CRASH/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' /nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 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-I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 find_neighbors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 fix_axis_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 load_balance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_faces.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_nodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 number_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 octree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 potential_force_averages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 refine_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make CRASH make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/CRASH.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/CRASH.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE -lCRASH \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [CRASH_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/CRASH.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [CRASH] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [CRASH] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_levelset_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_levelset] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_hyades2d_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -e=HdRadCrash -u=Crash -g=10,10,2,200,200 BATSRUS/Config.pl WARNING: nI=10 nJ=10 nK=2 does not allow AMR Writing new grid size 10,10,2,200,200 into src/ModSize.f90... make CRASH make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd /nobackup/gtoth/Tmp/SWMF/util/CRASH/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' /nobackup/gtoth/Tmp/SWMF/lib/libCRASH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/CRASH/src' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModNodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModOctree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPartSteady.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPolarNeighbor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCT.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRestartFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRaytrace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSatelliteFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSolarwind.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTimeStepControl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 BATS_methods.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 MH_set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 advect_points.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 allocate_vars.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_criteria.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_gradients.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_timestep.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 coarsen_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 covariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 create_soln_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 exchange_messages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 explicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 find_neighbors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 fix_axis_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 load_balance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_faces.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_nodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 number_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 octree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 potential_force_averages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 refine_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make CRASH make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/CRASH.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/CRASH.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE -lCRASH \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [CRASH_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/CRASH.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [CRASH] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [CRASH] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_hyades2d_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_hyades2d] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_graydiffusion_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -e=HdEosRad -u=GrayDiffusion -g=32,4,4,16,16 Writing new grid size 32,4,4,16,16 into src/ModSize.f90... make BATSRUS make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModNodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModOctree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_graydiffusion_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_graydiffusion] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_corona_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Sc -e=MhdCorona -g=4,4,4,3000,1 Writing new grid size 4,4,4,3000,1 into src/ModSize.f90... make BATSRUS PIDL make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src 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-I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 refine_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_corona_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_corona] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_coronasph_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Sc -e=MhdCorona -g=4,4,4,3000,1 make BATSRUS PIDL make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: `libBATSRUS.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_coronasph_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_coronasph] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_earthsph_compile make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -e=Mhd -u=Default -g=8,8,8,600,300 Writing new grid size 8,8,8,600,300 into src/ModSize.f90... make make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src 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-I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[9]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[9]: *** [BATSRUS_general] Error 1 make[9]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[8]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [BATSRUS] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: *** [test_earthsph_compile] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_earthsph_start] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: [test_earthsph] Error 2 (ignored) make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_2bodyplot_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -e=Mhd -u=Default -g=8,8,8,600,300 make make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: `libBATSRUS.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_2bodyplot_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_2bodyplot] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_titan_compile make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Titan -e=MhdTitan -g=6,6,6,1000,200 Writing new grid size 6,6,6,1000,200 into src/ModSize.f90... make make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModNodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModOctree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPartSteady.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPolarNeighbor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCT.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRestartFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRaytrace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSatelliteFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSolarwind.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTimeStepControl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 BATS_methods.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 MH_set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 advect_points.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 allocate_vars.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_criteria.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_gradients.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_timestep.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 coarsen_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 covariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 create_soln_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 exchange_messages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 explicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src 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-I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_faces.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_nodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 number_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 octree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 potential_force_averages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 refine_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[9]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[9]: *** [BATSRUS_general] Error 1 make[9]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[8]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [BATSRUS] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: *** [test_titan_compile] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_titan_start] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: [test_titan] Error 2 (ignored) make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_titan_restart_save make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd run_test; cp Param/TITAN/PARAM.in.restartsave PARAM.in /bin/sh: line 0: cd: run_test: No such file or directory #./TestParam.pl -n=1 run_test/PARAM.in cd run_test; mpirun -mca btl ^openib ./BATSRUS.exe > runlog /bin/sh: line 0: cd: run_test: No such file or directory -------------------------------------------------------------------------- mpirun was unable to launch the specified application as it could not access or execute an executable: Executable: ./BATSRUS.exe Node: nyx-login2.engin.umich.edu while attempting to start process rank 0. -------------------------------------------------------------------------- make[5]: *** [test_titan_restart_save] Error 131 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_titan_restart] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: [test_titan] Error 2 (ignored) make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_mars_compile make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Mars -e=MhdMars -g=6,6,6,1000,200 make make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[9]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[9]: *** [BATSRUS_general] Error 1 make[9]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[8]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [BATSRUS] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: *** [test_mars_compile] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_mars_start] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: [test_mars] Error 2 (ignored) make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_venus_compile make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Venus -e=MhdMars -g=6,6,6,1000,200 make make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRestartFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 BATS_methods.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 MH_set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_criteria.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 explicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 load_balance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[9]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[9]: *** [BATSRUS_general] Error 1 make[9]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[8]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [BATSRUS] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: *** [test_venus_compile] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_venus_start] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: [test_venus] Error 2 (ignored) make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_venus_restart_save make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd run_test; cp Param/VENUS/PARAM.in.restartsave PARAM.in /bin/sh: line 0: cd: run_test: No such file or directory #./TestParam.pl -n=1 run_test/PARAM.in cd run_test; mpirun -mca btl ^openib ./BATSRUS.exe > runlog /bin/sh: line 0: cd: run_test: No such file or directory -------------------------------------------------------------------------- mpirun was unable to launch the specified application as it could not access or execute an executable: Executable: ./BATSRUS.exe Node: nyx-login2.engin.umich.edu while attempting to start process rank 0. -------------------------------------------------------------------------- make[5]: *** [test_venus_restart_save] Error 131 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_venus_restart] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: [test_venus] Error 2 (ignored) make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_saturn_compile make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Saturn -e=MhdHyp -g=8,8,8,720,1 Writing new grid size 8,8,8,720,1 into src/ModSize.f90... make make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[8]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[9]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[9]: *** [BATSRUS_general] Error 1 make[9]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[8]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [BATSRUS] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: *** [test_saturn_compile] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_saturn_start] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: [test_saturn] Error 2 (ignored) make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_comet_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Comet6Sp -e=MhdComet -g=8,8,8,600,100 Writing new grid size 8,8,8,600,100 into src/ModSize.f90... make make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModNodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModOctree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPartSteady.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPolarNeighbor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCT.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRestartFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRaytrace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSatelliteFile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSolarwind.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTimeStepControl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 BATS_methods.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 MH_set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 advect_points.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 allocate_vars.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_criteria.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_gradients.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_timestep.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 coarsen_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 covariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 create_soln_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 exchange_messages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 explicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 find_neighbors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 fix_axis_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 load_balance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_faces.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_nodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 number_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 octree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 potential_force_averages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 refine_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src 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-I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w 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-I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_comet_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_comet] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_magnetometer_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Default -e=Mhd -g=4,4,4,400,1 Writing new grid size 4,4,4,400,1 into src/ModSize.f90... make make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHeatConduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModResistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGroundMagPerturb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModNodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModOctree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPartSteady.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPolarNeighbor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCT.f90 f95 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-c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_magnetometer_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_magnetometer] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make test_func_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Config.pl -u=Default -e=Mhd -g=8,8,8,720,70 Writing new grid size 8,8,8,720,70 into src/ModSize.f90... make BATSRUS PIDL PSPH make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src 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-I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd src; make BATSRUS make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 main.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe main.o \ -L. -lBATSRUS -L/nobackup/gtoth/Tmp/SWMF/lib -lMAGNETOGRAM -lEMPIRICALEE -lTIMING -lSHARE \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [BATSRUS_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/BATSRUS.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[6]: *** [BATSRUS] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make[5]: *** [BATSRUS] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[4]: *** [test_func_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[3]: *** [test_func] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: [test] Error 2 (ignored) -rw-r--r-- 1 gtoth aoss 26 Sep 13 21:02 test_2bodyplot.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:11 test_comet.diff -rw-r--r-- 1 gtoth aoss 23 Sep 13 20:56 test_corona.diff -rw-r--r-- 1 gtoth aoss 26 Sep 13 20:59 test_coronasph.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:59 test_earthsph.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 20:46 test_eosgodunov.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:17 test_func.diff -rw-r--r-- 1 gtoth aoss 30 Sep 13 20:54 test_graydiffusion.diff -rw-r--r-- 1 gtoth aoss 24 Sep 13 20:34 test_hallmhd.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:51 test_hyades2d.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:48 test_levelset.diff -rw-r--r-- 1 gtoth aoss 29 Sep 13 21:15 test_magnetometer.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:05 test_mars.diff -rw-r--r-- 1 gtoth aoss 24 Sep 13 20:41 test_mhdions.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 20:43 test_mhdnoncons.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 20:36 test_multifluid.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:39 test_multiion.diff -rw-r--r-- 1 gtoth aoss 23 Sep 13 21:09 test_saturn.diff -rw-r--r-- 1 gtoth aoss 26 Sep 13 20:31 test_shocktube.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:02 test_titan.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 21:05 test_titan_restart.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:07 test_venus.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 21:09 test_venus_restart.diff make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' echo "IE/Ridley_serial test is incomplete" > notest.diff make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM' echo "There is no test for IE/RIM" > notest.diff make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS' IH/BATSRUS is tested in GM/BATSRUS make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS_share' IH/BATSRUS_share is tested in GM/BATSRUS make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS_share' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' make test_compile make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' make HEIDI make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' touch src/Makefile.DEPEND src/Makefile.RULES srcInterface/Makefile.DEPEND make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' make /nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 NOMPI.f90 ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a NOMPI.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' /nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModEIEConductance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModAMIE_Interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModErrors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModEIE_Interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModMHD_Interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModExtras.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModEIEFiles.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ED_ModInterface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ED_ModIons.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 -132 ModWeimer.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 AMIE_Library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 EIE_End.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 EIE_Initialize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 EIE_Library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 EIE_IoLibrary.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 EIE_set_inputs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 readAMIEoutput.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 readMHDoutput.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 -132 mh86.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 -132 hmr89.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 -132 iz94.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ihp.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 merge_str.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 MHD_Library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ED_Interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ED_ReadIonHeat.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 -132 ED_r_elec_ed_lup_subs.f rm -f /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a ModEIEConductance.o ModAMIE_Interface.o ModErrors.o ModEIE_Interface.o ModMHD_Interface.o ModExtras.o ModEIEFiles.o ED_ModInterface.o ED_ModIons.o ModWeimer.o AMIE_Library.o EIE_End.o EIE_Initialize.o EIE_Library.o EIE_IoLibrary.o EIE_set_inputs.o readAMIEoutput.o readMHDoutput.o mh86.o hmr89.o iz94.o ihp.o merge_str.o MHD_Library.o ED_Interface.o ED_ReadIonHeat.o ED_r_elec_ed_lup_subs.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save -r8 ModTsyganenko.f rm -f /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a ModTsyganenko.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/src' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModInit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModProcIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_main.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiCurrents.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiDGCPM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiDrifts.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModIonoHeidi.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiSatellites.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiInput.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiBField.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModHeidiNeutralH.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_setup.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_icbc.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_coefficients.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_operators.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_currents.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_output.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_waves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 -132 recipes.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 -132 pbo.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 -132 wgrdar.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 get_potential.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_check.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_init.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 heidi_run.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 read_ring_current.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 write_ring_current.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 epencalc.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 iono_init.f90 rm -rf Tmp_; mkdir Tmp_ cd Tmp_; \ ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a; \ ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a; \ ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a ar: /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a: No such file or directory mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/HEIDI.exe heidi_main.o ModHeidiSize.o ModHeidiMain.o ModHeidiCurrents.o ModHeidiDGCPM.o ModHeidiDrifts.o ModHeidiIO.o ModHeidiWaves.o ModInit.o ModIonoHeidi.o ModHeidiSatellites.o ModProcIM.o ModHeidiInput.o ModHeidiBField.o ModHeidiNeutralH.o heidi_setup.o heidi_icbc.o heidi_coefficients.o heidi_operators.o heidi_currents.o heidi_output.o heidi_waves.o recipes.o pbo.o wgrdar.o get_potential.o heidi_check.o heidi_init.o heidi_run.o read_ring_current.o write_ring_current.o epencalc.o iono_init.o Tmp_/*.o -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[6]: *** [/nobackup/gtoth/Tmp/SWMF/bin/HEIDI.exe] Error 1 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/src' make[5]: *** [HEIDI] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/src' make[4]: *** [HEIDI] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' make[3]: *** [test_compile] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' make[2]: *** [test] Error 2 make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM' echo "There is no test for RCM" > notest.diff make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2' make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/BATSRUS' OH/BATSRUS is tested in GM/BATSRUS make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/BATSRUS' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/DGCPM' echo "PS/DGCPM test is incomplete" > notest.diff make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/DGCPM' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make test_compile PLANET=Saturn make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' ./Config.pl -Saturn make PWOM make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 -132 ModIri90.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 -132 ModMsis90.f rm -f /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a ModIri90.o ModMsis90.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModIndicesInterfaces.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 ModIndices.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 read_NGDC_indices.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 read_NOAAHPI_indices.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 read_MHDIMF_indices.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 insert_into_indices_array.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 indices_set_inputs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 indices_library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 IO_library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 IO_set_inputs.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a ModIndicesInterfaces.o ModIndices.o read_NGDC_indices.o read_NOAAHPI_indices.o read_MHDIMF_indices.o insert_into_indices_array.o indices_set_inputs.o indices_library.o IO_library.o IO_set_inputs.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' cd src; make PWOM make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModParameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModCommonPlanet.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModPW.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModPass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 main.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModCommonVariables.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModNeutralPW.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModGmPressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModPwImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModPwTime.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModAurora.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 pw.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 polar_wind.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 initialize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 solver.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 cvmgp.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 Efield.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 eheat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 eheat_flux_explicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 iheat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 calcdt.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 diffusion.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 calc_cfl.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 calc_diffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 solver_rusanov.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 Get_Neutral.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 get_electrodynamic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 print_electrodynamics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 write_restart.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 set_upper_bc.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 get_weimer_potential.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 read_restart.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 set_vertical_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 calc_dt.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 getcfeh2_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 startupPW_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 neutral_atmosphere_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O0 -132 collisionPW_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 calc_chemical_equilibrium.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 print_plot.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 upper_heat_conduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 get_rate.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/PWOM.exe main.o ModPW.o ModParameters.o ModCommonPlanet.o ModCommonVariables.o ModNeutralPW.o ModPass.o ModPwImplicit.o ModGmPressure.o ModAurora.o ModPwTime.o pw.o polar_wind.o set_parameters.o initialize.o solver.o cvmgp.o Efield.o eheat_flux.o eheat_flux_explicit.o iheat_flux.o calcdt.o diffusion.o calc_cfl.o calc_diffusion.o solver_rusanov.o Get_Neutral.o get_electrodynamic.o print_electrodynamics.o write_restart.o set_upper_bc.o get_weimer_potential.o read_restart.o set_vertical_grid.o calc_dt.o getcfeh2_planet.o startupPW_planet.o neutral_atmosphere_planet.o collisionPW_planet.o calc_chemical_equilibrium.o print_plot.o upper_heat_conduction.o get_rate.o \ -L/nobackup/gtoth/Tmp/SWMF/lib -lEMPIRICALIE -lEMPIRICALUA -lINDICES -lSHARE -lTIMING \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [PWOM_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/PWOM.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make[6]: *** [PWOM] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make[5]: *** [PWOM] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[4]: *** [test_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[3]: *** [test_saturn] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make test_restart_save make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' cp input/Saturn/restart_iline* run_test/PW/restartIN/ cp: target `run_test/PW/restartIN/' is not a directory make[4]: *** [test_restart_save] Error 1 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[3]: *** [test_restart] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make test_compile PLANET=Earth make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' ./Config.pl -Earth make PWOM make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' cd /nobackup/gtoth/Tmp/SWMF/share/Library/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' cd /nobackup/gtoth/Tmp/SWMF/util/TIMING/src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' cd /nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' cd /nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' cd src; make PWOM make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModCommonPlanet.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModPW.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModPass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 main.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModCommonVariables.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModPwImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModAurora.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 ModGlow.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 pw.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 polar_wind.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 initialize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 solver.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 Efield.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 eheat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 eheat_flux_explicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 iheat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 calcdt.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 diffusion.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 calc_cfl.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 calc_diffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 solver_rusanov.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 get_electrodynamic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 print_electrodynamics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 write_restart.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 set_upper_bc.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 get_weimer_potential.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 read_restart.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 set_vertical_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 calc_dt.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 PhotoElectronPW_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 glowex_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 rcolum_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 startupPW_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 fieldm_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 precipitationPW_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 solzen_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 suncor_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 sperfc_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 chap_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 neutral_atmosphere_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 ssflux_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 vcd_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O0 -132 collisionPW_planet.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 print_plot.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 upper_heat_conduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -c -w -r8 -O3 -132 ggm_planet.f make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/PWOM.exe main.o ModPW.o ModParameters.o ModCommonPlanet.o ModCommonVariables.o ModNeutralPW.o ModPass.o ModPwImplicit.o ModGmPressure.o ModAurora.o ModPwTime.o ModGlow.o pw.o polar_wind.o set_parameters.o initialize.o solver.o cvmgp.o Efield.o eheat_flux.o eheat_flux_explicit.o iheat_flux.o calcdt.o diffusion.o calc_cfl.o calc_diffusion.o solver_rusanov.o Get_Neutral.o get_electrodynamic.o print_electrodynamics.o write_restart.o set_upper_bc.o get_weimer_potential.o read_restart.o set_vertical_grid.o calc_dt.o PhotoElectronPW_planet.o glowex_planet.o rcolum_planet.o startupPW_planet.o fieldm_planet.o precipitationPW_planet.o solzen_planet.o suncor_planet.o sperfc_planet.o chap_planet.o neutral_atmosphere_planet.o ssflux_planet.o vcd_planet.o collisionPW_planet.o print_plot.o upper_heat_conduction.o ggm_planet.o \ -L/nobackup/gtoth/Tmp/SWMF/lib -lEMPIRICALIE -lEMPIRICALUA -lINDICES -lSHARE -lTIMING \ -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [PWOM_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/PWOM.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make[6]: *** [PWOM] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make[5]: *** [PWOM] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[4]: *** [test_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[3]: *** [test_earth] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make test_restart_save make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' cp input/Earth/restart_iline* run_test/PW/restartIN/ cp: target `run_test/PW/restartIN/' is not a directory make[4]: *** [test_restart_save] Error 1 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[3]: *** [test_restart] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[2]: [test] Error 2 (ignored) make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make test_compile make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make RBE make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' make /nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' /nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' Makefile:26: warning: overriding commands for target `.f.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:72: warning: ignoring old commands for target `.f.o' Makefile:29: warning: overriding commands for target `.f90.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:66: warning: ignoring old commands for target `.f90.o' make libRBE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' Makefile:26: warning: overriding commands for target `.f.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:72: warning: ignoring old commands for target `.f.o' Makefile:29: warning: overriding commands for target `.f90.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:66: warning: ignoring old commands for target `.f90.o' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 ModRbe.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 ModRbSat.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 ModWriteTec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 rbe_subs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 plot_potential.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 trace_line.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 trace_dipole.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 plot_fieldline.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 set_parameters.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 pbo_2.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 geopack.f rm -f libRBE.a ar -rs libRBE.a ModRbe.o ModRbSat.o ModWriteTec.o rbe_subs.o plot_potential.o trace_line.o trace_dipole.o plot_fieldline.o set_parameters.o pbo_2.o geopack.o ar: creating libRBE.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' libRBE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' Makefile:26: warning: overriding commands for target `.f.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:72: warning: ignoring old commands for target `.f.o' Makefile:29: warning: overriding commands for target `.f90.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:66: warning: ignoring old commands for target `.f90.o' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' Makefile:26: warning: overriding commands for target `.f.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:72: warning: ignoring old commands for target `.f.o' Makefile:29: warning: overriding commands for target `.f90.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:66: warning: ignoring old commands for target `.f90.o' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -save -r8 rbe_main.f90 rm -rf Tmp_; mkdir Tmp_ cd Tmp_; \ ar -x ../libRBE.a; \ ar -x /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a; \ ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a; \ ar -x /nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a; \ ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a;\ ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a; mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/rbe.exe rbe_main.o Tmp_/*.o -r8 -Bstatic rm -rf Tmp_ make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' Program /nobackup/gtoth/Tmp/SWMF/bin/rbe.exe has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make test_rundir make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' rm -rf run_test make rundir RUNDIR=run_test STANDALONE=YES RBDIR=`pwd` make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' mkdir -p run_test/RB cd run_test/RB; \ mkdir restartOUT restartIN plots cp /nobackup/gtoth/Tmp/SWMF/RB/RBE/input/rbe_e.fin run_test/RB/ cp /nobackup/gtoth/Tmp/SWMF/RB/RBE/input/B_wave_eq.dat run_test/RB/ cp /nobackup/gtoth/Tmp/SWMF/RB/RBE/input/Horne_chorus.tgz run_test/RB/ cd run_test/RB/ ; \ tar xfz Horne_chorus.tgz make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make test_run make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' cd run_test; ./rbe.exe > runlog Warning: Floating underflow occurred make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make test_check make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' gunzip -c output/2002f296_e.fls.standalone.gz > run_test/RB/2002f296_e.fls.ref /nobackup/gtoth/Tmp/SWMF/share/Scripts/DiffNum.pl -r=0.001 -a=1e-10 \ run_test/RB/plots/2002f296_e.fls run_test/RB/2002f296_e.fls.ref \ > test.diff ls -l test.diff -rw-r--r-- 1 gtoth aoss 0 Sep 13 21:26 test.diff make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Rice' echo "Ther is no test for RB/Rice" > notest.diff make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Rice' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RiceV5' echo "The RB/RiceV5 test is incomplete" > notest.diff make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RiceV5' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS' SC/BATSRUS is tested in GM/BATSRUS make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/FLAMPA' make[2]: *** No rule to make target `test'. Stop. make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/FLAMPA' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Kota' make[2]: `test' is up to date. make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Kota' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM' echo "UA/GITM test is incomplete" > notest.diff make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM' make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make test_earth_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' ./Config.pl -Earth -g=9,9,50,4 make GITM make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/srcSphereAB' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 AB_ARRAY_module.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 AB_ERROR_module.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 AB_COMM_module.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 AB_module.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 AB_XFER_module.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 AB_SPH_module.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 AB_XFER_array_util.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 AB_XFER_1blk_util.f90 Creating libSphere library ar -rs libSphere.a AB_module.o AB_XFER_module.o AB_ERROR_module.o AB_SPH_module.o AB_COMM_module.o AB_ARRAY_module.o AB_XFER_array_util.o AB_XFER_1blk_util.o ar: creating libSphere.a libSphere.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/srcSphereAB' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/srcGlow' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 Mod_GLOW.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 ModCIMPIT.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 ModCXPARS.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 egrid.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 ephoto.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 etrans.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 exsect.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 fieldm.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 gchem.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 geomag.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 glow.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 maxt.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 qback.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 rcolum.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 rout.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 solzen.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 ssflux.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 -132 vquart.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../src -c -w -r8 -O3 GL_library.f90 Creating GLOW library ar: creating libGLOW.a libGLOW.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/srcGlow' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModConstants.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModTime.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModPlanet.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModInputs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModGITM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 main.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModEUV.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 planet.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSatellites.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 satellites.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModRates.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_electron_temperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 aurora.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModElectrodynamics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 get_potential.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_efield.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 set_inputs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_energy_deposition.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 get_glow.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSphereInterface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 time_routines.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModVertical.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModLimiter.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 vertical_solver.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 stretch_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_mpi.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 restart.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 initialize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_msis.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_iri.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_altitude.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 finalize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_neutral_friction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 -132 lubksb.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 -132 ludcmp.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_electrodynamics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 divergence.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_rates.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_timestep.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 exchange_messages_sphere.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModTimingGITM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 timing.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 advance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 advance_vertical.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 advance_horizontal.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModTides.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 set_vertical_bcs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 set_horizontal_bcs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 output.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 output_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_conduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_avesza.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_euv.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O1 calc_chemistry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_ion_v.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 chapman_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 stop_file.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 read_inputs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 add_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 -132 apex.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 write_output.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 gradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 tides.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 user.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/GITM.exe main.o planet.o satellites.o calc_electron_temperature.o aurora.o get_potential.o calc_efield.o set_inputs.o init_energy_deposition.o get_glow.o init_grid.o time_routines.o vertical_solver.o library.o stretch_grid.o init_mpi.o restart.o initialize.o init_msis.o init_iri.o init_b0.o init_altitude.o finalize.o calc_neutral_friction.o lubksb.o ludcmp.o calc_electrodynamics.o divergence.o calc_pressure.o calc_rates.o calc_timestep.o exchange_messages_sphere.o timing.o advance.o advance_vertical.o advance_horizontal.o set_vertical_bcs.o set_horizontal_bcs.o output.o output_common.o logfile.o calc_conduction.o calc_physics.o calc_avesza.o calc_euv.o calc_chemistry.o calc_ion_v.o chapman_new.o stop_file.o read_inputs.o add_sources.o calc_sources.o apex.o write_output.o gradient.o tides.o user.o ModSize.o ModTime.o ModConstants.o ModPlanet.o ModGITM.o ModSources.o ModVertical.o ModSphereInterface.o ModInputs.o ModTimingGITM.o ModRates.o ModEUV.o ModElectrodynamics.o ModSatellites.o ModLimiter.o ModTides.o ModUser.o \ -L../srcSphereAB -lSphere \ -L/nobackup/gtoth/Tmp/SWMF/lib -lEMPIRICALIE -lEMPIRICALUA -lINDICES -lSHARE \ -L../srcGlow -lGLOW -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [GITM_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/GITM.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' make[6]: *** [GITM] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' make[5]: *** [GITM] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make[4]: *** [test_earth_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make[3]: *** [test_earth] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make[2]: [test] Error 2 (ignored) make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make test_mars_compile make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' ./Config.pl -Mars -g=9,9,60,4 Writing new grid size 9,9,60,4 into src/ModSize.f90... Configuring GITM for Mars!! make GITM make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/srcSphereAB' libSphere.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/srcSphereAB' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/srcGlow' libGLOW.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/srcGlow' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModPlanet.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModInputs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModGITM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 main.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModEUV.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 planet.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSatellites.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 satellites.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_electron_temperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 aurora.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModElectrodynamics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 get_potential.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_efield.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 set_inputs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_energy_deposition.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 get_glow.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSphereInterface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModVertical.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 vertical_solver.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 stretch_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_mpi.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 restart.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModRates.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 initialize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_msis.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_altitude.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 finalize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_neutral_friction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_electrodynamics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 divergence.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_rates.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_timestep.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 exchange_messages_sphere.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 advance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 advance_vertical.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 advance_horizontal.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 set_vertical_bcs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 set_horizontal_bcs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 output.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 output_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_conduction.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_avesza.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_euv.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O1 calc_chemistry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_ion_v.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 chapman_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 stop_file.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 read_inputs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 add_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 write_output.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 gradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModTides.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 tides.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I../srcSphereAB -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 user.f90 make[8]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/GITM.exe main.o planet.o satellites.o calc_electron_temperature.o aurora.o get_potential.o calc_efield.o set_inputs.o init_energy_deposition.o get_glow.o init_grid.o time_routines.o vertical_solver.o library.o stretch_grid.o init_mpi.o restart.o initialize.o init_msis.o init_iri.o init_b0.o init_altitude.o finalize.o calc_neutral_friction.o lubksb.o ludcmp.o calc_electrodynamics.o divergence.o calc_pressure.o calc_rates.o calc_timestep.o exchange_messages_sphere.o timing.o advance.o advance_vertical.o advance_horizontal.o set_vertical_bcs.o set_horizontal_bcs.o output.o output_common.o logfile.o calc_conduction.o calc_physics.o calc_avesza.o calc_euv.o calc_chemistry.o calc_ion_v.o chapman_new.o stop_file.o read_inputs.o add_sources.o calc_sources.o apex.o write_output.o gradient.o tides.o user.o ModSize.o ModTime.o ModConstants.o ModPlanet.o ModGITM.o ModSources.o ModVertical.o ModSphereInterface.o ModInputs.o ModTimingGITM.o ModRates.o ModEUV.o ModElectrodynamics.o ModSatellites.o ModLimiter.o ModTides.o ModUser.o \ -L../srcSphereAB -lSphere \ -L/nobackup/gtoth/Tmp/SWMF/lib -lEMPIRICALIE -lEMPIRICALUA -lINDICES -lSHARE \ -L../srcGlow -lGLOW -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[8]: *** [GITM_general] Error 1 make[8]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' make[7]: *** [/nobackup/gtoth/Tmp/SWMF/bin/GITM.exe] Error 2 make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' make[6]: *** [GITM] Error 2 make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2/src' make[5]: *** [GITM] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make[4]: *** [test_mars_compile] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make[3]: *** [test_mars] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' make[2]: [test] Error 2 (ignored) ls -l *.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:27 test_earth.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:28 test_mars.diff make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/GITM2' ls -ltr [A-Z][A-Z]/*/*.diff -rw-r--r-- 1 gtoth aoss 26 Sep 13 20:31 GM/BATSRUS/test_shocktube.diff -rw-r--r-- 1 gtoth aoss 24 Sep 13 20:34 GM/BATSRUS/test_hallmhd.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 20:36 GM/BATSRUS/test_multifluid.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:39 GM/BATSRUS/test_multiion.diff -rw-r--r-- 1 gtoth aoss 24 Sep 13 20:41 GM/BATSRUS/test_mhdions.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 20:43 GM/BATSRUS/test_mhdnoncons.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 20:46 GM/BATSRUS/test_eosgodunov.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:48 GM/BATSRUS/test_levelset.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:51 GM/BATSRUS/test_hyades2d.diff -rw-r--r-- 1 gtoth aoss 30 Sep 13 20:54 GM/BATSRUS/test_graydiffusion.diff -rw-r--r-- 1 gtoth aoss 23 Sep 13 20:56 GM/BATSRUS/test_corona.diff -rw-r--r-- 1 gtoth aoss 26 Sep 13 20:59 GM/BATSRUS/test_coronasph.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:59 GM/BATSRUS/test_earthsph.diff -rw-r--r-- 1 gtoth aoss 26 Sep 13 21:02 GM/BATSRUS/test_2bodyplot.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:02 GM/BATSRUS/test_titan.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 21:05 GM/BATSRUS/test_titan_restart.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:05 GM/BATSRUS/test_mars.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:07 GM/BATSRUS/test_venus.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 21:09 GM/BATSRUS/test_venus_restart.diff -rw-r--r-- 1 gtoth aoss 23 Sep 13 21:09 GM/BATSRUS/test_saturn.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:11 GM/BATSRUS/test_comet.diff -rw-r--r-- 1 gtoth aoss 29 Sep 13 21:15 GM/BATSRUS/test_magnetometer.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:17 GM/BATSRUS/test_func.diff -rw-r--r-- 1 gtoth aoss 16 Sep 13 21:20 IM/HEIDI/test.diff -rw-r--r-- 1 gtoth aoss 28 Sep 13 21:20 IE/RIM/notest.diff -rw-r--r-- 1 gtoth aoss 36 Sep 13 21:20 IE/Ridley_serial/notest.diff -rw-r--r-- 1 gtoth aoss 12 Sep 13 21:21 PW/PWOM/test_Saturn_plots.diff -rw-r--r-- 1 gtoth aoss 16 Sep 13 21:21 PW/PWOM/test_Saturn.diff -rw-r--r-- 1 gtoth aoss 28 Sep 13 21:21 PS/DGCPM/notest.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 21:21 IM/RCM/notest.diff -rw-r--r-- 1 gtoth aoss 26 Sep 13 21:21 IM/RCM2/notest.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:21 PW/PWOM/test_Saturn_restart.diff -rw-r--r-- 1 gtoth aoss 12 Sep 13 21:21 PW/PWOM/test_Earth_plots.diff -rw-r--r-- 1 gtoth aoss 16 Sep 13 21:21 PW/PWOM/test_Earth.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:22 PW/PWOM/test_Earth_restart.diff -rw-r--r-- 1 gtoth aoss 0 Sep 13 21:26 RB/RBE/test.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 21:27 UA/GITM/notest.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:27 UA/GITM2/test_earth.diff -rw-r--r-- 1 gtoth aoss 33 Sep 13 21:27 RB/RiceV5/notest.diff -rw-r--r-- 1 gtoth aoss 28 Sep 13 21:27 RB/Rice/notest.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:28 UA/GITM2/test_mars.diff make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make test_pw_compile make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF' ./Config.pl -v=Empty,PW/PWOM -o=PW:Earth Modifying versions in Makefile.def make SWMF PIDL make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a ModTiming.o timing_cpu.o timing.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_comp_param.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_comp_info.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_world.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_time.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -r8 -O3 CON_physics.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a CON_comp_info.o CON_comp_param.o CON_world.o CON_time.o CON_physics.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_domain_decomposition.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 ModInitGridStorage.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_grid_storage.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_grid_descriptor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_global_vector.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_router.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_global_message_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_integrator.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_buffer_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_test_global_message_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_coupler.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a CON_domain_decomposition.o ModInitGridStorage.o CON_grid_storage.o CON_grid_descriptor.o CON_global_vector.o CON_router.o CON_global_message_pass.o CON_integrator.o CON_buffer_grid.o CON_test_global_message_pass.o CON_coupler.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libGM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 GM_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libGM.a GM_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libGM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libGM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 IE_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIE.a IE_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 IH_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIH.a IH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 IM_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIM.a IM_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 LA_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libLA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libLA.a LA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libLA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 OH_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libOH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libOH.a OH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libOH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 PS_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPS.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPS.a PS_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make libPWOM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' rm -f libPWOM.a ar -rs libPWOM.a ModPW.o ModParameters.o ModCommonPlanet.o ModCommonVariables.o ModNeutralPW.o ModPass.o ModPwImplicit.o ModGmPressure.o ModAurora.o ModPwTime.o ModGlow.o pw.o polar_wind.o set_parameters.o initialize.o solver.o cvmgp.o Efield.o eheat_flux.o eheat_flux_explicit.o iheat_flux.o calcdt.o diffusion.o calc_cfl.o calc_diffusion.o solver_rusanov.o Get_Neutral.o get_electrodynamic.o print_electrodynamics.o write_restart.o set_upper_bc.o get_weimer_potential.o read_restart.o set_vertical_grid.o calc_dt.o PhotoElectronPW_planet.o glowex_planet.o rcolum_planet.o startupPW_planet.o fieldm_planet.o precipitationPW_planet.o solzen_planet.o suncor_planet.o sperfc_planet.o chap_planet.o neutral_atmosphere_planet.o ssflux_planet.o vcd_planet.o collisionPW_planet.o print_plot.o upper_heat_conduction.o ggm_planet.o ar: creating libPWOM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' libPWOM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/srcInterface' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 PW_wrapper.f90 cp -f ../src/libPWOM.a /nobackup/gtoth/Tmp/SWMF/lib/libPW.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPW.a PW_wrapper.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libPW.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 RB_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libRB.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libRB.a RB_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libRB.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 SC_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSC.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSC.a SC_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSC.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 SP_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSP.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSP.a SP_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSP.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 UA_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libUA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libUA.a UA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_gm_ie.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_ih_gm.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_gm_im.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_ie_im.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_ie_ua.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_ih_oh.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_ih_sc.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_mh_sp.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_gm_rb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_ie_pw.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_gm_pw.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_ie_ps.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_ie_rb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_wrapper.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -c -w -r8 -O3 CON_couple_all.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a CON_couple_gm_ie.o CON_couple_ih_gm.o CON_couple_gm_im.o CON_couple_ie_im.o CON_couple_ie_ua.o CON_couple_ih_oh.o CON_couple_ih_sc.o CON_couple_mh_sp.o CON_couple_gm_rb.o CON_couple_ie_pw.o CON_couple_gm_pw.o CON_couple_ie_ps.o CON_couple_ie_rb.o CON_wrapper.o CON_couple_all.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Interface/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 CON_variables.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Interface/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 CON_io.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Interface/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 CON_session.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Interface/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 CON_main.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Interface/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 CON_methods.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Interface/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 swmf_interface.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a CON_main.o CON_variables.o CON_io.o CON_session.o CON_methods.o swmf_interface.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a has been brought up to date. rm -rf Tmp_* mkdir Tmp_SHARE; cd Tmp_SHARE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a mkdir Tmp_TIMING; cd Tmp_TIMING; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a mkdir Tmp_INDICES; cd Tmp_INDICES; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a mkdir Tmp_MAGNETOGRAM; cd Tmp_MAGNETOGRAM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a mkdir Tmp_EMPIRICALEE; cd Tmp_EMPIRICALEE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a mkdir Tmp_EMPIRICALGM; cd Tmp_EMPIRICALGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a mkdir Tmp_EMPIRICALIE; cd Tmp_EMPIRICALIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a mkdir Tmp_EMPIRICALUA; cd Tmp_EMPIRICALUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a mkdir Tmp_LIBRARY; cd Tmp_LIBRARY; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a mkdir Tmp_COUPLER; cd Tmp_COUPLER; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a mkdir Tmp_INTERFACE; cd Tmp_INTERFACE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a mkdir Tmp_CONTROL; cd Tmp_CONTROL; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a mkdir Tmp_LIBGM; cd Tmp_LIBGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libGM.a #^CMP IF GM mkdir Tmp_LIBIE; cd Tmp_LIBIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIE.a #^CMP IF IE mkdir Tmp_LIBIH; cd Tmp_LIBIH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIH.a #^CMP IF IH mkdir Tmp_LIBIM; cd Tmp_LIBIM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIM.a #^CMP IF IM mkdir Tmp_LIBLA; cd Tmp_LIBLA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLA.a #^CMP IF LA mkdir Tmp_LIBOH; cd Tmp_LIBOH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libOH.a #^CMP IF OH mkdir Tmp_LIBPS; cd Tmp_LIBPS; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPS.a #^CMP IF PS mkdir Tmp_LIBPW; cd Tmp_LIBPW; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPW.a #^CMP IF PW mkdir Tmp_LIBRB; cd Tmp_LIBRB; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libRB.a #^CMP IF RB mkdir Tmp_LIBSC; cd Tmp_LIBSC; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSC.a #^CMP IF SC mkdir Tmp_LIBSP; cd Tmp_LIBSP; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSP.a #^CMP IF SP mkdir Tmp_LIBUA; cd Tmp_LIBUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libUA.a #^CMP IF UA make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Interface/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 swmf.f90 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/SWMF.exe swmf.o Tmp_*/*.o -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[4]: *** [SWMFEXE] Error 1 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[3]: *** [SWMF] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[2]: *** [test_pw_compile] Error 2 make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[1]: *** [test_pw] Error 2 make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make: [test] Error 2 (ignored) make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make test_rb_compile make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF' ./Config.pl -v=Empty,RB/RBE,GM/BATSRUS Modifying versions in Makefile.def ./Config.pl -g=GM:8,8,8,770,1 -o=GM:e=Mhd,u=Default Writing new grid size 8,8,8,770,1 into src/ModSize.f90... make SWMF PIDL make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a ModTiming.o timing_cpu.o timing.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE 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-I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w 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-I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libGM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModGridDescriptor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModBuffer.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_ih_buffer.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModIeGrid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_ie.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_get_for_ie.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_wrapper.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 update_lagrangian_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModDensityAndGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModRadioWaveRaytracing.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModRadioWaveImage.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_ih.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModGmImCoupling.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_get_for_im.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_im.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModGmRbCoupling.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_get_for_rb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModPwGrid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_get_for_pw.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_pw.f90 cp -f ../src/libBATSRUS.a /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ModGridDescriptor.o ModBuffer.o GM_put_from_ih_buffer.o GM_wrapper.o update_lagrangian_grid.o ModDensityAndGradient.o ModRadioWaveImage.o ModRadioWaveRaytracing.o GM_put_from_ih.o ModGmImCoupling.o GM_get_for_im.o GM_put_from_im.o ModGmRbCoupling.o GM_get_for_rb.o GM_get_for_ie.o GM_put_from_ie.o ModIeGrid.o GM_get_for_pw.o GM_put_from_pw.o ModPwGrid.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libGM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIE.a IE_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIH.a IH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIM.a IM_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libLA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libLA.a LA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libLA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libOH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libOH.a OH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libOH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPS.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPS.a PS_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -r8 -O3 PW_wrapper.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPW.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPW.a PW_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPW.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' Makefile:26: warning: overriding commands for target `.f.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:72: warning: ignoring old commands for target `.f.o' Makefile:29: warning: overriding commands for target `.f90.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:66: warning: ignoring old commands for target `.f90.o' make libRBE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' Makefile:26: warning: overriding commands for target `.f.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:72: warning: ignoring old commands for target `.f.o' Makefile:29: warning: overriding commands for target `.f90.o' /nobackup/gtoth/Tmp/SWMF/Makefile.conf:66: warning: ignoring old commands for target `.f90.o' make[7]: `libRBE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' libRBE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/srcInterface' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 RB_wrapper.f90 cp -f ../src/libRBE.a /nobackup/gtoth/Tmp/SWMF/lib/libRB.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libRB.a RB_wrapper.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libRB.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/RBE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSC.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSC.a SC_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSC.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSP.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSP.a SP_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSP.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libUA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libUA.a UA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a CON_couple_gm_ie.o CON_couple_ih_gm.o CON_couple_gm_im.o CON_couple_ie_im.o CON_couple_ie_ua.o CON_couple_ih_oh.o CON_couple_ih_sc.o CON_couple_mh_sp.o CON_couple_gm_rb.o CON_couple_ie_pw.o CON_couple_gm_pw.o CON_couple_ie_ps.o CON_couple_ie_rb.o CON_wrapper.o CON_couple_all.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `/nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a has been brought up to date. rm -rf Tmp_* mkdir Tmp_SHARE; cd Tmp_SHARE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a mkdir Tmp_TIMING; cd Tmp_TIMING; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a mkdir Tmp_INDICES; cd Tmp_INDICES; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a mkdir Tmp_MAGNETOGRAM; cd Tmp_MAGNETOGRAM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a mkdir Tmp_EMPIRICALEE; cd Tmp_EMPIRICALEE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a mkdir Tmp_EMPIRICALGM; cd Tmp_EMPIRICALGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a mkdir Tmp_EMPIRICALIE; cd Tmp_EMPIRICALIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a mkdir Tmp_EMPIRICALUA; cd Tmp_EMPIRICALUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a mkdir Tmp_LIBRARY; cd Tmp_LIBRARY; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a mkdir Tmp_COUPLER; cd Tmp_COUPLER; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a mkdir Tmp_INTERFACE; cd Tmp_INTERFACE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a mkdir Tmp_CONTROL; cd Tmp_CONTROL; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a mkdir Tmp_LIBGM; cd Tmp_LIBGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libGM.a #^CMP IF GM mkdir Tmp_LIBIE; cd Tmp_LIBIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIE.a #^CMP IF IE mkdir Tmp_LIBIH; cd Tmp_LIBIH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIH.a #^CMP IF IH mkdir Tmp_LIBIM; cd Tmp_LIBIM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIM.a #^CMP IF IM mkdir Tmp_LIBLA; cd Tmp_LIBLA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLA.a #^CMP IF LA mkdir Tmp_LIBOH; cd Tmp_LIBOH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libOH.a #^CMP IF OH mkdir Tmp_LIBPS; cd Tmp_LIBPS; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPS.a #^CMP IF PS mkdir Tmp_LIBPW; cd Tmp_LIBPW; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPW.a #^CMP IF PW mkdir Tmp_LIBRB; cd Tmp_LIBRB; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libRB.a #^CMP IF RB mkdir Tmp_LIBSC; cd Tmp_LIBSC; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSC.a #^CMP IF SC mkdir Tmp_LIBSP; cd Tmp_LIBSP; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSP.a #^CMP IF SP mkdir Tmp_LIBUA; cd Tmp_LIBUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libUA.a #^CMP IF UA make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `swmf.o' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/SWMF.exe swmf.o Tmp_*/*.o -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[4]: *** [SWMFEXE] Error 1 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[3]: *** [SWMF] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[2]: *** [test_rb_compile] Error 2 make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[1]: *** [test_rb] Error 2 make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make: [test] Error 2 (ignored) make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make test_esmf_compile make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF' ./Config.pl -v=Empty,GM/BATSRUS,IE/Ridley_serial Modifying versions in Makefile.def ./Config.pl -g=GM:8,8,8,400,100,IE:91,181 -o=GM:u=Default,e=Mhd Writing new grid size 8,8,8,400,100 into src/ModSize.f90... make ESMF_SWMF make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a ModTiming.o timing_cpu.o timing.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCovariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModGeometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBoundaryCells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModConserveFlux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPhysics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEnergy.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIonoVelocity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUserEmpty.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModUser.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExpansionFactors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModHallResist.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModTemperature.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModWaves.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMessagePass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModRadDiffusion.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram 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-c -w -r8 -O3 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libGM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModGridDescriptor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModBuffer.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_ih_buffer.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModIeGrid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_ie.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_get_for_ie.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_wrapper.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 update_lagrangian_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModDensityAndGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModRadioWaveRaytracing.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModRadioWaveImage.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_ih.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModGmImCoupling.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_get_for_im.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_im.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModGmRbCoupling.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_get_for_rb.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_get_for_pw.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 GM_put_from_pw.f90 cp -f ../src/libBATSRUS.a /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ModGridDescriptor.o ModBuffer.o GM_put_from_ih_buffer.o GM_wrapper.o update_lagrangian_grid.o ModDensityAndGradient.o ModRadioWaveImage.o ModRadioWaveRaytracing.o GM_put_from_ih.o ModGmImCoupling.o GM_get_for_im.o GM_put_from_im.o ModGmRbCoupling.o GM_get_for_rb.o GM_get_for_ie.o GM_put_from_ie.o ModIeGrid.o GM_get_for_pw.o GM_put_from_pw.o ModPwGrid.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libGM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 IE_ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 IE_ModIo.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModIonosphere.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModProcIE.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModIE_Interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModFiles.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModConductance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 IE_solve.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 IE_wrapper.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 IE_Initialize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 IE_Library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 IE_gather.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 iono_conductances.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 iono_currents.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 iono_joule.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 iono_solver.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 Create_Region2_Currents.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ionosphere.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ModSize.o IE_ModMain.o IE_ModIo.o ModIonosphere.o ModProcIE.o ModIE_Interface.o ModFiles.o ModConductance.o IE_solve.o IE_wrapper.o IE_Initialize.o IE_Library.o IE_gather.o iono_conductances.o iono_currents.o iono_joule.o iono_solver.o Create_Region2_Currents.o ionosphere.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' /nobackup/gtoth/Tmp/SWMF/lib/libIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIH.a IH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIM.a IM_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libLA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libLA.a LA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libLA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libOH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libOH.a OH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libOH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPS.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPS.a PS_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPW.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPW.a PW_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPW.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libRB.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libRB.a RB_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libRB.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSC.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSC.a SC_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSC.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSP.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSP.a SP_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSP.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libUA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libUA.a UA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a CON_couple_gm_ie.o CON_couple_ih_gm.o CON_couple_gm_im.o CON_couple_ie_im.o CON_couple_ie_ua.o CON_couple_ih_oh.o CON_couple_ih_sc.o CON_couple_mh_sp.o CON_couple_gm_rb.o CON_couple_ie_pw.o CON_couple_gm_pw.o CON_couple_ie_ps.o CON_couple_ie_rb.o CON_wrapper.o CON_couple_all.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `/nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a has been brought up to date. rm -rf Tmp_* mkdir Tmp_SHARE; cd Tmp_SHARE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a mkdir Tmp_TIMING; cd Tmp_TIMING; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a mkdir Tmp_INDICES; cd Tmp_INDICES; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a mkdir Tmp_MAGNETOGRAM; cd Tmp_MAGNETOGRAM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a mkdir Tmp_EMPIRICALEE; cd Tmp_EMPIRICALEE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a mkdir Tmp_EMPIRICALGM; cd Tmp_EMPIRICALGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a mkdir Tmp_EMPIRICALIE; cd Tmp_EMPIRICALIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a mkdir Tmp_EMPIRICALUA; cd Tmp_EMPIRICALUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a mkdir Tmp_LIBRARY; cd Tmp_LIBRARY; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a mkdir Tmp_COUPLER; cd Tmp_COUPLER; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a mkdir Tmp_INTERFACE; cd Tmp_INTERFACE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a mkdir Tmp_CONTROL; cd Tmp_CONTROL; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a mkdir Tmp_LIBGM; cd Tmp_LIBGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libGM.a #^CMP IF GM mkdir Tmp_LIBIE; cd Tmp_LIBIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIE.a #^CMP IF IE mkdir Tmp_LIBIH; cd Tmp_LIBIH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIH.a #^CMP IF IH mkdir Tmp_LIBIM; cd Tmp_LIBIM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIM.a #^CMP IF IM mkdir Tmp_LIBLA; cd Tmp_LIBLA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLA.a #^CMP IF LA mkdir Tmp_LIBOH; cd Tmp_LIBOH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libOH.a #^CMP IF OH mkdir Tmp_LIBPS; cd Tmp_LIBPS; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPS.a #^CMP IF PS mkdir Tmp_LIBPW; cd Tmp_LIBPW; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPW.a #^CMP IF PW mkdir Tmp_LIBRB; cd Tmp_LIBRB; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libRB.a #^CMP IF RB mkdir Tmp_LIBSC; cd Tmp_LIBSC; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSC.a #^CMP IF SC mkdir Tmp_LIBSP; cd Tmp_LIBSP; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSP.a #^CMP IF SP mkdir Tmp_LIBUA; cd Tmp_LIBUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libUA.a #^CMP IF UA rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSWMF.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSWMF.a Tmp_*/*.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSWMF.a SWMF library /nobackup/gtoth/Tmp/SWMF/lib/libSWMF.a has been brought up to date. make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/ESMF/ESMF_SWMF/src' Makefile:21: warning: overriding commands for target `.f90.o' /home/gtoth/ESMF/ver2.2rp1/build/common.mk:1842: warning: ignoring old commands for target `.f90.o' perl /nobackup/gtoth/Tmp/SWMF/share/Scripts/depend.pl ESMF_SWMF_Coupler.o SWMF_GridComp.o ESMF_GridComp.o ESMF_SWMF_GridComp.o ESMF_SWMF_Driver.o ESMF_SWMF_Mod.o make /nobackup/gtoth/Tmp/SWMF/bin/ESMF_SWMF.exe make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/ESMF/ESMF_SWMF/src' Makefile:21: warning: overriding commands for target `.f90.o' /home/gtoth/ESMF/ver2.2rp1/build/common.mk:1842: warning: ignoring old commands for target `.f90.o' mpif90 -c -I/home/gtoth/ESMF/ver2.2rp1/mod/modO/Linux.nag.32.default -O0 -kind=byte -dusty \ -free ESMF_SWMF_Mod.f90 Fatal Error: ESMF_SWMF_Mod.f90, line 5: Cannot find module ESMF_MOD detected at ESMF_MOD@ make[5]: *** [ESMF_SWMF_Mod.o] Error 2 make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/ESMF/ESMF_SWMF/src' make[4]: *** [EXE] Error 2 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/ESMF/ESMF_SWMF/src' make[3]: *** [ESMF_SWMF] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[2]: *** [test_esmf_compile] Error 2 make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[1]: *** [test_esmf] Error 2 make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make: [test] Error 2 (ignored) make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make test1_compile make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF' ./Config.pl -v=Empty,GM/BATSRUS,IE/Ridley_serial,PW/PWOM Modifying versions in Makefile.def ./Config.pl -g=GM:8,8,8,400,100 -o=GM:u=Default,e=Mhd,PW:Earth make SWMF PIDL make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a ModTiming.o timing_cpu.o timing.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libGM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' cp -f ../src/libBATSRUS.a /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ModGridDescriptor.o ModBuffer.o GM_put_from_ih_buffer.o GM_wrapper.o update_lagrangian_grid.o ModDensityAndGradient.o ModRadioWaveImage.o ModRadioWaveRaytracing.o GM_put_from_ih.o ModGmImCoupling.o GM_get_for_im.o GM_put_from_im.o ModGmRbCoupling.o GM_get_for_rb.o GM_get_for_ie.o GM_put_from_ie.o ModIeGrid.o GM_get_for_pw.o GM_put_from_pw.o ModPwGrid.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libGM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ModSize.o IE_ModMain.o IE_ModIo.o ModIonosphere.o ModProcIE.o ModIE_Interface.o ModFiles.o ModConductance.o IE_solve.o IE_wrapper.o IE_Initialize.o IE_Library.o IE_gather.o iono_conductances.o iono_currents.o iono_joule.o iono_solver.o Create_Region2_Currents.o ionosphere.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' /nobackup/gtoth/Tmp/SWMF/lib/libIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIH.a IH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIM.a IM_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libLA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libLA.a LA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libLA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libOH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libOH.a OH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libOH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPS.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPS.a PS_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' make libPWOM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' rm -f libPWOM.a ar -rs libPWOM.a ModPW.o ModParameters.o ModCommonPlanet.o ModCommonVariables.o ModNeutralPW.o ModPass.o ModPwImplicit.o ModGmPressure.o ModAurora.o ModPwTime.o ModGlow.o pw.o polar_wind.o set_parameters.o initialize.o solver.o cvmgp.o Efield.o eheat_flux.o eheat_flux_explicit.o iheat_flux.o calcdt.o diffusion.o calc_cfl.o calc_diffusion.o solver_rusanov.o Get_Neutral.o get_electrodynamic.o print_electrodynamics.o write_restart.o set_upper_bc.o get_weimer_potential.o read_restart.o set_vertical_grid.o calc_dt.o PhotoElectronPW_planet.o glowex_planet.o rcolum_planet.o startupPW_planet.o fieldm_planet.o precipitationPW_planet.o solzen_planet.o suncor_planet.o sperfc_planet.o chap_planet.o neutral_atmosphere_planet.o ssflux_planet.o vcd_planet.o collisionPW_planet.o print_plot.o upper_heat_conduction.o ggm_planet.o ar: creating libPWOM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' libPWOM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/srcInterface' cp -f ../src/libPWOM.a /nobackup/gtoth/Tmp/SWMF/lib/libPW.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPW.a PW_wrapper.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libPW.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/PWOM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libRB.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libRB.a RB_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libRB.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSC.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSC.a SC_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSC.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSP.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSP.a SP_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSP.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libUA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libUA.a UA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a CON_couple_gm_ie.o CON_couple_ih_gm.o CON_couple_gm_im.o CON_couple_ie_im.o CON_couple_ie_ua.o CON_couple_ih_oh.o CON_couple_ih_sc.o CON_couple_mh_sp.o CON_couple_gm_rb.o CON_couple_ie_pw.o CON_couple_gm_pw.o CON_couple_ie_ps.o CON_couple_ie_rb.o CON_wrapper.o CON_couple_all.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `/nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a has been brought up to date. rm -rf Tmp_* mkdir Tmp_SHARE; cd Tmp_SHARE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a mkdir Tmp_TIMING; cd Tmp_TIMING; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a mkdir Tmp_INDICES; cd Tmp_INDICES; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a mkdir Tmp_MAGNETOGRAM; cd Tmp_MAGNETOGRAM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a mkdir Tmp_EMPIRICALEE; cd Tmp_EMPIRICALEE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a mkdir Tmp_EMPIRICALGM; cd Tmp_EMPIRICALGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a mkdir Tmp_EMPIRICALIE; cd Tmp_EMPIRICALIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a mkdir Tmp_EMPIRICALUA; cd Tmp_EMPIRICALUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a mkdir Tmp_LIBRARY; cd Tmp_LIBRARY; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a mkdir Tmp_COUPLER; cd Tmp_COUPLER; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a mkdir Tmp_INTERFACE; cd Tmp_INTERFACE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a mkdir Tmp_CONTROL; cd Tmp_CONTROL; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a mkdir Tmp_LIBGM; cd Tmp_LIBGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libGM.a #^CMP IF GM mkdir Tmp_LIBIE; cd Tmp_LIBIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIE.a #^CMP IF IE mkdir Tmp_LIBIH; cd Tmp_LIBIH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIH.a #^CMP IF IH mkdir Tmp_LIBIM; cd Tmp_LIBIM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIM.a #^CMP IF IM mkdir Tmp_LIBLA; cd Tmp_LIBLA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLA.a #^CMP IF LA mkdir Tmp_LIBOH; cd Tmp_LIBOH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libOH.a #^CMP IF OH mkdir Tmp_LIBPS; cd Tmp_LIBPS; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPS.a #^CMP IF PS mkdir Tmp_LIBPW; cd Tmp_LIBPW; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPW.a #^CMP IF PW mkdir Tmp_LIBRB; cd Tmp_LIBRB; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libRB.a #^CMP IF RB mkdir Tmp_LIBSC; cd Tmp_LIBSC; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSC.a #^CMP IF SC mkdir Tmp_LIBSP; cd Tmp_LIBSP; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSP.a #^CMP IF SP mkdir Tmp_LIBUA; cd Tmp_LIBUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libUA.a #^CMP IF UA make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `swmf.o' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/SWMF.exe swmf.o Tmp_*/*.o -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[4]: *** [SWMFEXE] Error 1 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[3]: *** [SWMF] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[2]: *** [test1_compile] Error 2 make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[1]: *** [test1] Error 2 make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make: [test] Error 2 (ignored) make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make test2_compile make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF' ./Config.pl -v=Empty,SC/BATSRUS,IH/BATSRUS Modifying versions in Makefile.def make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF' rm -rf IH/BATSRUS/src IH/BATSRUS/srcUser IH/BATSRUS/srcEquation \ IH/BATSRUS/srcInterface/*.f90 mkdir -p IH/BATSRUS/src IH/BATSRUS/srcUser IH/BATSRUS/srcEquation cd GM/BATSRUS/src; cp *.f90 *.h Makefile* ../../../IH/BATSRUS/src cd IH/BATSRUS/src; rm -f main.f90 cd GM/BATSRUS/srcInterface/; \ cp ModGridDescriptor.f90 ModBuffer.f90 \ update_lagrangian_grid.f90 \ ModRadioWaveImage.f90 ModRadioWaveRaytracing.f90 \ ModDensityAndGradient.f90\ ../../../IH/BATSRUS/srcInterface cp IH/BATSRUS_share/src/IH_*.f90 IH/BATSRUS/srcInterface cp GM/BATSRUS/srcUser/*.f90 IH/BATSRUS/srcUser/ cp GM/BATSRUS/srcEquation/*.f90 IH/BATSRUS/srcEquation/ cd GM/BATSRUS; \ cp Makefile.def Makefile.conf PARAM.XML Config.pl \ ../../IH/BATSRUS/ echo '*' > IH/BATSRUS/src/.cvsignore cd IH/BATSRUS; \ /nobackup/gtoth/Tmp/SWMF/share/Scripts/Methods.pl IH src/*.f90 src/*.h srcInterface/*.f90 srcUser/*.f90 srcEquation/*.f90; \ /nobackup/gtoth/Tmp/SWMF/share/Scripts/Rename.pl -w -r -common=IH src/*.f90 src/*.h srcInterface/*.f90 srcUser/*.f90 srcEquation/*.f90 Finished 49 replacements in file src/advect_points.f90 Finished 18 replacements in file src/allocate_vars.f90 Finished 37 replacements in file src/amr_criteria.f90 Finished 21 replacements in file src/amr.f90 Finished 58 replacements in file src/amr_physics.f90 Finished 180 replacements in file src/BATS_methods.f90 Finished 12 replacements in file src/calc_gradients.f90 Finished 24 replacements in file src/calc_heat_flux.f90 Finished 34 replacements in file src/calc_sources.f90 Finished 24 replacements in file src/calc_timestep.f90 Finished 34 replacements in file src/clean_divb.f90 Finished 18 replacements in file src/coarsen_grid.f90 Finished 24 replacements in file src/conserve_flux.f90 Finished 116 replacements in file src/constrain_B.f90 Finished 149 replacements in file src/covariant.f90 Finished 88 replacements in file src/create_soln_blocks.f90 Finished 67 replacements in file src/exchange_messages.f90 Finished 47 replacements in file src/explicit.f90 Finished 50 replacements in file src/find_neighbors.f90 Finished 17 replacements in file src/fix_axis_cells.f90 Finished 25 replacements in file src/get_im_pressure.f90 Finished 52 replacements in file src/implicit.f90 Finished 168 replacements in file src/impl_interface.f90 Finished 25 replacements in file src/impl_jacobian.f90 Finished 41 replacements in file src/impl_matvec.f90 Finished 35 replacements in file src/impl_newton.f90 Finished 226 replacements in file src/library.f90 Finished 94 replacements in file src/load_balance.f90 Finished 105 replacements in file src/message_pass_cells.f90 Finished 51 replacements in file src/message_pass_faces.f90 Finished 91 replacements in file src/message_pass_nodes.f90 Finished 125 replacements in file src/MH_set_parameters.f90 Finished 8 replacements in file src/ModAdvance.f90 Finished 8 replacements in file src/ModAdvance_static.f90 Finished 3 replacements in file src/ModAMR.f90 Finished 5 replacements in file src/ModB0.f90 Finished 21 replacements in file src/ModBlockData.f90 Finished 20 replacements in file src/ModBoundaryCells.f90 Finished 5 replacements in file src/ModCharacteristic.f90 Finished 13 replacements in file src/ModConserveFlux.f90 Finished 9 replacements in file src/ModCoronalHeating.f90 Finished 5 replacements in file src/ModCovariant.f90 Finished 5 replacements in file src/ModCT.f90 Finished 5 replacements in file src/ModCT_static.f90 Finished 4 replacements in file src/ModCube.f90 Finished 12 replacements in file src/ModCurrent.f90 Finished 6 replacements in file src/ModEnergy.f90 Finished 8 replacements in file src/ModEquation.f90 Finished 33 replacements in file src/ModExpansionFactors.f90 Finished 2 replacements in file src/ModExtraVariables.f90 Finished 80 replacements in file src/ModFaceFlux.f90 Finished 18 replacements in file src/ModFaceGradient.f90 Finished 24 replacements in file src/ModFaceValue.f90 Finished 7 replacements in file src/ModGeometry.f90 Finished 7 replacements in file src/ModGeometry_static.f90 Finished 4 replacements in file src/ModGridGeometry.f90 Finished 26 replacements in file src/ModGroundMagPerturb.f90 Finished 42 replacements in file src/ModHallResist.f90 Finished 45 replacements in file src/ModHeatConduction.f90 Finished 12 replacements in file src/ModImplicit.f90 Finished 7 replacements in file src/ModIO.f90 Finished 10 replacements in file src/ModIonoVelocity.f90 Finished 7 replacements in file src/ModMain.f90 Finished 23 replacements in file src/ModMessagePass.f90 Finished 3 replacements in file src/ModMultiFluid.f90 Finished 56 replacements in file src/ModMultiGroupDiffusion.f90 Finished 36 replacements in file src/ModMultiIon.f90 Finished 5 replacements in file src/ModNodes.f90 Finished 5 replacements in file src/ModNodes_static.f90 Finished 3 replacements in file src/ModOctree.f90 Finished 9 replacements in file src/ModOctreeNew.f90 Finished 4 replacements in file src/ModParallel.f90 Finished 10 replacements in file src/ModPartSteady.f90 Finished 6 replacements in file src/ModPhysics.f90 Finished 14 replacements in file src/ModPointImplicit.f90 Finished 28 replacements in file src/ModPolarNeighbor.f90 Finished 2 replacements in file src/ModPrecond_cray.f90 Finished 2 replacements in file src/ModProcMH.f90 Finished 2 replacements in file src/ModProject.f90 Finished 59 replacements in file src/ModRadDiffusion.f90 Finished 6 replacements in file src/ModRaytrace.f90 Finished 6 replacements in file src/ModRaytrace_static.f90 Finished 9 replacements in file src/ModResistivity.f90 Finished 59 replacements in file src/ModRestartFile.f90 Finished 45 replacements in file src/ModSatelliteFile.f90 Finished 2 replacements in file src/ModSingleFluid.f90 Finished 3 replacements in file src/ModSize.f90 Finished 3 replacements in file src/ModSize_orig.f90 Finished 3 replacements in file src/ModSize_shock.f90 Finished 21 replacements in file src/ModSolarwind.f90 Finished 95 replacements in file src/ModTemperature.f90 Finished 10 replacements in file src/ModTimeStepControl.f90 Finished 4 replacements in file src/ModUserDefault.f90 Finished 16 replacements in file src/ModUserEmpty.f90 Finished 4 replacements in file src/ModUser.f90 Finished 6 replacements in file src/ModWaves.f90 Finished 16 replacements in file src/number_blocks.f90 Finished 87 replacements in file src/octree.f90 Finished 41 replacements in file src/potential_force_averages.f90 Finished 39 replacements in file src/proj_bicgstab.f90 Finished 26 replacements in file src/proj_cg.f90 Finished 114 replacements in file src/project_B.f90 Finished 38 replacements in file src/ray_pass.f90 Finished 95 replacements in file src/ray_trace.f90 Finished 173 replacements in file src/ray_trace_new.f90 Finished 26 replacements in file src/refine_grid.f90 Finished 10 replacements in file src/rotate.f90 Finished 80 replacements in file src/set_b0.f90 Finished 35 replacements in file src/set_BCs.f90 Finished 36 replacements in file src/set_block_geometry.f90 Finished 120 replacements in file src/set_ICs_diss_test.f90 Finished 17 replacements in file src/set_ICs.f90 Finished 97 replacements in file src/set_outer_BCs.f90 Finished 38 replacements in file src/set_physics.f90 Finished 8 replacements in file src/set_resistivity.f90 Finished 15 replacements in file src/specify_refinement.f90 Finished 50 replacements in file src/update_states.f90 Finished 14 replacements in file src/update_states_MHD.f90 Finished 137 replacements in file src/write_logfile.f90 Finished 81 replacements in file src/write_plot_common.f90 Finished 10 replacements in file src/write_plot_idl.f90 Finished 30 replacements in file src/write_plot_los.f90 Finished 20 replacements in file src/write_plot_radiowave.f90 Finished 8 replacements in file src/write_plot_sph.f90 Finished 21 replacements in file src/write_plot_tec.f90 Finished 23 replacements in file src/write_progress.f90 No variables to rename in file src/user_module.h Finished 6 replacements in file srcInterface/IH_get_for_gm.f90 Finished 4 replacements in file srcInterface/IH_get_for_oh.f90 Finished 4 replacements in file srcInterface/IH_get_for_sc.f90 Finished 7 replacements in file srcInterface/IH_get_for_sp.f90 No variables to rename in file srcInterface/IH_inquire_if_spherical.f90 Finished 3 replacements in file srcInterface/IH_put_from_oh.f90 Finished 1 replacements in file srcInterface/IH_set_buffer_grid.f90 Finished 27 replacements in file srcInterface/IH_wrapper.f90 Finished 10 replacements in file srcInterface/ModBuffer.f90 Finished 12 replacements in file srcInterface/ModDensityAndGradient.f90 Finished 13 replacements in file srcInterface/ModGridDescriptor.f90 Finished 16 replacements in file srcInterface/ModRadioWaveImage.f90 Finished 9 replacements in file srcInterface/ModRadioWaveRaytracing.f90 Finished 17 replacements in file srcInterface/update_lagrangian_grid.f90 Finished 19 replacements in file srcUser/ModUserCCMC.f90 Finished 31 replacements in file srcUser/ModUserComet1Sp.f90 Finished 40 replacements in file srcUser/ModUserComet6Sp.f90 Finished 74 replacements in file srcUser/ModUserCrash.f90 Finished 39 replacements in file srcUser/ModUserEarthXray.f90 Finished 19 replacements in file srcUser/ModUserEnceladus.f90 Finished 11 replacements in file srcUser/ModUserEos.f90 Finished 38 replacements in file srcUser/ModUserGrayDiffusion.f90 Finished 53 replacements in file srcUser/ModUserHeatConduction.f90 Finished 112 replacements in file srcUser/ModUserHeliosphere.f90 Finished 7 replacements in file srcUser/ModUserIh.f90 Finished 20 replacements in file srcUser/ModUserJupiter.f90 Finished 9 replacements in file srcUser/ModUserKelvinHelmholtz.f90 Finished 33 replacements in file srcUser/ModUserLightFront.f90 Finished 89 replacements in file srcUser/ModUserMars.f90 Finished 70 replacements in file srcUser/ModUserMarsFluids.f90 Finished 28 replacements in file srcUser/ModUserMarshak.f90 Finished 28 replacements in file srcUser/ModUserMultiIon.f90 Finished 38 replacements in file srcUser/ModUserNonGyro.f90 Finished 12 replacements in file srcUser/ModUserOh.f90 Finished 54 replacements in file srcUser/ModUserOhNeutrals.f90 Finished 54 replacements in file srcUser/ModUserOuterHelio.f90 Finished 11 replacements in file srcUser/ModUserPointImplicit.f90 Finished 37 replacements in file srcUser/ModUserSaturn3sp.f90 Finished 21 replacements in file srcUser/ModUserSaturn.f90 Finished 71 replacements in file srcUser/ModUserSc.f90 Finished 57 replacements in file srcUser/ModUserScHeat.f90 Finished 119 replacements in file srcUser/ModUserScWaves.f90 Finished 20 replacements in file srcUser/ModUserSwIono.f90 Finished 87 replacements in file srcUser/ModUserTitan.f90 Finished 28 replacements in file srcUser/ModUserTorus.f90 Finished 95 replacements in file srcUser/ModUserVenus.f90 Finished 19 replacements in file srcUser/ModUserWaveReflection.f90 Finished 26 replacements in file srcUser/ModUserWaves.f90 Finished 6 replacements in file srcEquation/ModEquationCrash.f90 Finished 6 replacements in file srcEquation/ModEquationHdCrash.f90 Finished 6 replacements in file srcEquation/ModEquationHdEos.f90 Finished 6 replacements in file srcEquation/ModEquationHdEosRad.f90 Finished 6 replacements in file srcEquation/ModEquationHd.f90 Finished 6 replacements in file srcEquation/ModEquationHdRadCrash.f90 Finished 5 replacements in file srcEquation/ModEquationMhdAlfven.f90 Finished 8 replacements in file srcEquation/ModEquationMhdComet.f90 Finished 8 replacements in file srcEquation/ModEquationMhdCorona.f90 Finished 5 replacements in file srcEquation/ModEquationMhdEosRad.f90 Finished 8 replacements in file srcEquation/ModEquationMhd.f90 Finished 7 replacements in file srcEquation/ModEquationMhdHd.f90 Finished 8 replacements in file srcEquation/ModEquationMhdHyp.f90 Finished 8 replacements in file srcEquation/ModEquationMhdHypPe.f90 Finished 4 replacements in file srcEquation/ModEquationMhdIons.f90 Finished 4 replacements in file srcEquation/ModEquationMhdIonsPe.f90 Finished 8 replacements in file srcEquation/ModEquationMhdMars.f90 Finished 4 replacements in file srcEquation/ModEquationMhdMarsFluids.f90 Finished 8 replacements in file srcEquation/ModEquationMhdNonCons.f90 Finished 8 replacements in file srcEquation/ModEquationMhdPpar.f90 Finished 8 replacements in file srcEquation/ModEquationMhdPw.f90 Finished 8 replacements in file srcEquation/ModEquationMhdSaturn3sp.f90 Finished 8 replacements in file srcEquation/ModEquationMhdSwIono.f90 Finished 8 replacements in file srcEquation/ModEquationMhdTitan.f90 Finished 8 replacements in file srcEquation/ModEquationMhdWaves.f90 Finished 4 replacements in file srcEquation/ModEquationMultiIon.f90 Finished 7 replacements in file srcEquation/ModEquationOuterHelio.f90 Finished 6408 replacement(s) in 200 file(s) cd IH/BATSRUS/srcInterface; \ perl -i -pe 's?BATSRUS?IH_BATSRUS?' IH_*.f90; \ touch Makefile.DEPEND cd IH/BATSRUS; \ perl -i -pe 's/GM/IH/' Config.pl; \ ./Config.pl -u=Ih -e=Mhd make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF' rm -rf \ SC/BATSRUS/src \ SC/BATSRUS/srcUser \ SC/BATSRUS/srcEquation \ SC/BATSRUS/srcInterface/SC_wrapper.f90 \ SC/BATSRUS/srcInterface/SC_get_for_sp.f90 cd GM/BATSRUS; \ cp -f Makefile.conf ../../SC/BATSRUS; \ make COMP=SC DREL=TMP relax_src make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' ./Configure.pl -d=TMP -u \ -on=roeflux,awflux,lindeflux,userfiles,testing \ -off=ionosphere,boriscorr cd TMP; rm -f CVS_Entries .cvsignore cd TMP/srcInterface; \ rm -f .cvsignore GM_* ModIeGrid.f90 *bc.f90 *BC.f90 ModPwGrid.f90 cd TMP; \ perl -i -pe 's/GM/SC/' Config.pl; \ perl -i -pe 's?GM?SC?g' Makefile* Param/PARAM.DEFAULT make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd GM/BATSRUS/TMP; \ mv Config.pl PARAM.XML src srcUser srcEquation \ ../../../SC/BATSRUS;\ mv srcInterface/*.f90 ../../../SC/BATSRUS/srcInterface rm -rf GM/BATSRUS/TMP cp -f IH/BATSRUS_share/src/IH_wrapper.f90 \ SC/BATSRUS/srcInterface/SC_wrapper.f90 cp -f IH/BATSRUS_share/src/IH_get_for_sp.f90 \ SC/BATSRUS/srcInterface/SC_get_for_sp.f90 cd SC/BATSRUS/srcInterface/; perl -i -pe \ 's/IH/SC/g;s/BATSRUS/SC_BATSRUS/;s/Inner/Solar/;s/Heliosphere/Corona/'\ SC_wrapper.f90 SC_get_for_sp.f90 cd SC/BATSRUS/src; rm -f main.f90 cd SC/BATSRUS; \ /nobackup/gtoth/Tmp/SWMF/share/Scripts/Methods.pl SC src/*.f90 src/*.h srcInterface/*.f90 srcUser/*.f90 srcEquation/*.f90; \ /nobackup/gtoth/Tmp/SWMF/share/Scripts/Rename.pl -w -r -common=SC src/*.f90 src/*.h srcInterface/*.f90 srcUser/*.f90 srcEquation/*.f90 Finished 49 replacements in file src/advect_points.f90 Finished 18 replacements in file src/allocate_vars.f90 Finished 37 replacements in file src/amr_criteria.f90 Finished 21 replacements in file src/amr.f90 Finished 58 replacements in file src/amr_physics.f90 Finished 131 replacements in file src/BATS_methods.f90 Finished 12 replacements in file src/calc_gradients.f90 Finished 30 replacements in file src/calc_sources.f90 Finished 23 replacements in file src/calc_timestep.f90 Finished 18 replacements in file src/coarsen_grid.f90 Finished 24 replacements in file src/conserve_flux.f90 Finished 149 replacements in file src/covariant.f90 Finished 71 replacements in file src/create_soln_blocks.f90 Finished 35 replacements in file src/exchange_messages.f90 Finished 33 replacements in file src/explicit.f90 Finished 50 replacements in file src/find_neighbors.f90 Finished 17 replacements in file src/fix_axis_cells.f90 Finished 180 replacements in file src/library.f90 Finished 61 replacements in file src/load_balance.f90 Finished 71 replacements in file src/message_pass_cells.f90 Finished 51 replacements in file src/message_pass_faces.f90 Finished 73 replacements in file src/message_pass_nodes.f90 Finished 90 replacements in file src/MH_set_parameters.f90 Finished 8 replacements in file src/ModAdvance_static.f90 Finished 3 replacements in file src/ModAMR.f90 Finished 5 replacements in file src/ModB0.f90 Finished 21 replacements in file src/ModBlockData.f90 Finished 20 replacements in file src/ModBoundaryCells.f90 Finished 5 replacements in file src/ModCharacteristic.f90 Finished 13 replacements in file src/ModConserveFlux.f90 Finished 9 replacements in file src/ModCoronalHeating.f90 Finished 5 replacements in file src/ModCovariant.f90 Finished 4 replacements in file src/ModCube.f90 Finished 12 replacements in file src/ModCurrent.f90 Finished 6 replacements in file src/ModEnergy.f90 Finished 33 replacements in file src/ModExpansionFactors.f90 Finished 2 replacements in file src/ModExtraVariables.f90 Finished 68 replacements in file src/ModFaceFlux.f90 Finished 18 replacements in file src/ModFaceGradient.f90 Finished 22 replacements in file src/ModFaceValue.f90 Finished 7 replacements in file src/ModGeometry_static.f90 Finished 4 replacements in file src/ModGridGeometry.f90 Finished 26 replacements in file src/ModGroundMagPerturb.f90 Finished 42 replacements in file src/ModHallResist.f90 Finished 7 replacements in file src/ModIO.f90 Finished 10 replacements in file src/ModIonoVelocity.f90 Finished 7 replacements in file src/ModMain.f90 Finished 23 replacements in file src/ModMessagePass.f90 Finished 3 replacements in file src/ModMultiFluid.f90 Finished 36 replacements in file src/ModMultiIon.f90 Finished 5 replacements in file src/ModNodes_static.f90 Finished 3 replacements in file src/ModOctree.f90 Finished 9 replacements in file src/ModOctreeNew.f90 Finished 4 replacements in file src/ModParallel.f90 Finished 10 replacements in file src/ModPartSteady.f90 Finished 5 replacements in file src/ModPhysics.f90 Finished 14 replacements in file src/ModPointImplicit.f90 Finished 28 replacements in file src/ModPolarNeighbor.f90 Finished 2 replacements in file src/ModPrecond_cray.f90 Finished 2 replacements in file src/ModProcMH.f90 Finished 54 replacements in file src/ModRestartFile.f90 Finished 32 replacements in file src/ModSatelliteFile.f90 Finished 2 replacements in file src/ModSingleFluid.f90 Finished 3 replacements in file src/ModSize_orig.f90 Finished 3 replacements in file src/ModSize_shock.f90 Finished 21 replacements in file src/ModSolarwind.f90 Finished 95 replacements in file src/ModTemperature.f90 Finished 10 replacements in file src/ModTimeStepControl.f90 Finished 4 replacements in file src/ModUserDefault.f90 Finished 16 replacements in file src/ModUserEmpty.f90 Finished 6 replacements in file src/ModWaves.f90 Finished 16 replacements in file src/number_blocks.f90 Finished 72 replacements in file src/octree.f90 Finished 37 replacements in file src/potential_force_averages.f90 Finished 26 replacements in file src/refine_grid.f90 Finished 10 replacements in file src/rotate.f90 Finished 75 replacements in file src/set_b0.f90 Finished 33 replacements in file src/set_BCs.f90 Finished 32 replacements in file src/set_block_geometry.f90 Finished 15 replacements in file src/set_ICs.f90 Finished 96 replacements in file src/set_outer_BCs.f90 Finished 38 replacements in file src/set_physics.f90 Finished 15 replacements in file src/specify_refinement.f90 Finished 49 replacements in file src/update_states.f90 Finished 14 replacements in file src/update_states_MHD.f90 Finished 134 replacements in file src/write_logfile.f90 Finished 77 replacements in file src/write_plot_common.f90 Finished 10 replacements in file src/write_plot_idl.f90 Finished 30 replacements in file src/write_plot_los.f90 Finished 20 replacements in file src/write_plot_radiowave.f90 Finished 8 replacements in file src/write_plot_sph.f90 Finished 20 replacements in file src/write_plot_tec.f90 Finished 22 replacements in file src/write_progress.f90 No variables to rename in file src/user_module.h Finished 10 replacements in file srcInterface/ModBuffer.f90 Finished 12 replacements in file srcInterface/ModDensityAndGradient.f90 Finished 13 replacements in file srcInterface/ModGridDescriptor.f90 Finished 16 replacements in file srcInterface/ModRadioWaveImage.f90 Finished 9 replacements in file srcInterface/ModRadioWaveRaytracing.f90 No variables to rename in file srcInterface/SC_get_for_ih.f90 Finished 7 replacements in file srcInterface/SC_get_for_sp.f90 No variables to rename in file srcInterface/SC_inquire_if_spherical.f90 No variables to rename in file srcInterface/SC_put_from_ih.f90 Finished 27 replacements in file srcInterface/SC_wrapper.f90 Finished 17 replacements in file srcInterface/update_lagrangian_grid.f90 Finished 19 replacements in file srcUser/ModUserCCMC.f90 Finished 31 replacements in file srcUser/ModUserComet1Sp.f90 Finished 40 replacements in file srcUser/ModUserComet6Sp.f90 Finished 73 replacements in file srcUser/ModUserCrash.f90 Finished 39 replacements in file srcUser/ModUserEarthXray.f90 Finished 19 replacements in file srcUser/ModUserEnceladus.f90 Finished 11 replacements in file srcUser/ModUserEos.f90 Finished 37 replacements in file srcUser/ModUserGrayDiffusion.f90 Finished 51 replacements in file srcUser/ModUserHeatConduction.f90 Finished 112 replacements in file srcUser/ModUserHeliosphere.f90 Finished 7 replacements in file srcUser/ModUserIh.f90 Finished 20 replacements in file srcUser/ModUserJupiter.f90 Finished 9 replacements in file srcUser/ModUserKelvinHelmholtz.f90 Finished 32 replacements in file srcUser/ModUserLightFront.f90 Finished 89 replacements in file srcUser/ModUserMars.f90 Finished 70 replacements in file srcUser/ModUserMarsFluids.f90 Finished 27 replacements in file srcUser/ModUserMarshak.f90 Finished 28 replacements in file srcUser/ModUserMultiIon.f90 Finished 38 replacements in file srcUser/ModUserNonGyro.f90 Finished 12 replacements in file srcUser/ModUserOh.f90 Finished 54 replacements in file srcUser/ModUserOhNeutrals.f90 Finished 54 replacements in file srcUser/ModUserOuterHelio.f90 Finished 11 replacements in file srcUser/ModUserPointImplicit.f90 Finished 37 replacements in file srcUser/ModUserSaturn3sp.f90 Finished 21 replacements in file srcUser/ModUserSaturn.f90 Finished 71 replacements in file srcUser/ModUserSc.f90 Finished 57 replacements in file srcUser/ModUserScHeat.f90 Finished 119 replacements in file srcUser/ModUserScWaves.f90 Finished 20 replacements in file srcUser/ModUserSwIono.f90 Finished 86 replacements in file srcUser/ModUserTitan.f90 Finished 28 replacements in file srcUser/ModUserTorus.f90 Finished 94 replacements in file srcUser/ModUserVenus.f90 Finished 19 replacements in file srcUser/ModUserWaveReflection.f90 Finished 26 replacements in file srcUser/ModUserWaves.f90 Finished 6 replacements in file srcEquation/ModEquationCrash.f90 Finished 6 replacements in file srcEquation/ModEquationHdCrash.f90 Finished 6 replacements in file srcEquation/ModEquationHdEos.f90 Finished 6 replacements in file srcEquation/ModEquationHdEosRad.f90 Finished 6 replacements in file srcEquation/ModEquationHd.f90 Finished 6 replacements in file srcEquation/ModEquationHdRadCrash.f90 Finished 5 replacements in file srcEquation/ModEquationMhdAlfven.f90 Finished 8 replacements in file srcEquation/ModEquationMhdComet.f90 Finished 8 replacements in file srcEquation/ModEquationMhdCorona.f90 Finished 5 replacements in file srcEquation/ModEquationMhdEosRad.f90 Finished 8 replacements in file srcEquation/ModEquationMhd.f90 Finished 7 replacements in file srcEquation/ModEquationMhdHd.f90 Finished 8 replacements in file srcEquation/ModEquationMhdHyp.f90 Finished 8 replacements in file srcEquation/ModEquationMhdHypPe.f90 Finished 4 replacements in file srcEquation/ModEquationMhdIons.f90 Finished 4 replacements in file srcEquation/ModEquationMhdIonsPe.f90 Finished 8 replacements in file srcEquation/ModEquationMhdMars.f90 Finished 4 replacements in file srcEquation/ModEquationMhdMarsFluids.f90 Finished 8 replacements in file srcEquation/ModEquationMhdNonCons.f90 Finished 8 replacements in file srcEquation/ModEquationMhdPpar.f90 Finished 8 replacements in file srcEquation/ModEquationMhdPw.f90 Finished 8 replacements in file srcEquation/ModEquationMhdSaturn3sp.f90 Finished 8 replacements in file srcEquation/ModEquationMhdSwIono.f90 Finished 8 replacements in file srcEquation/ModEquationMhdTitan.f90 Finished 8 replacements in file srcEquation/ModEquationMhdWaves.f90 Finished 4 replacements in file srcEquation/ModEquationMultiIon.f90 Finished 7 replacements in file srcEquation/ModEquationOuterHelio.f90 Finished 4650 replacement(s) in 162 file(s) touch SC/BATSRUS/srcInterface/Makefile.DEPEND cd SC/BATSRUS; \ perl -i -pe 's/GM/SC/' Config.pl; \ ./Config.pl -install=c -u=Sc -e=MhdCorona Reinstalling BATSRUS as a SC component make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' make -s STATIC1 NAME=Advance make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' make -s STATIC1 NAME=Nodes make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' make -s STATIC1 NAME=Geometry make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS' make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' ./Config.pl -g=SC:4,4,4,3000,IH:8,8,8,400,1 Writing new grid size 8,8,8,400,1 into src/ModSize.f90... Writing new grid size 4,4,4,3000 into src/ModSize.f90... cd SC/BATSRUS; ./Config.pl -dynamic; cd ../.. cd IH/BATSRUS; ./Config.pl -dynamic; cd ../.. make SWMF PIDL EARTH_TRAJ make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a ModTiming.o timing_cpu.o timing.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libGM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libGM.a GM_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libGM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libGM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIE.a IE_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSingleFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExtraVariables.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModEquation.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMain.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModIO.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModProcMH.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModParallel.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModB0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAdvance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCube.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModAMR.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModBlockData.f90 f95 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-I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 constrain_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 implicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_interface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_jacobian.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_matvec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O0 impl_newton.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace_new.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_trace.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ray_pass.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 get_im_pressure.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 project_B.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_cg.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 proj_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_heat_flux.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_resistivity.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 clean_divb.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS/srcInterface' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModGridDescriptor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModBuffer.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 update_lagrangian_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModDensityAndGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModRadioWaveRaytracing.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 ModRadioWaveImage.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 IH_set_buffer_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 IH_get_for_gm.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 IH_get_for_oh.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 IH_get_for_sc.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 IH_get_for_sp.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 IH_put_from_oh.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I../src -c -w -r8 -O3 IH_wrapper.f90 cp -f ../src/libBATSRUS.a /nobackup/gtoth/Tmp/SWMF/lib/libIH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIH.a ModGridDescriptor.o ModBuffer.o update_lagrangian_grid.o ModRadioWaveImage.o ModRadioWaveRaytracing.o ModDensityAndGradient.o IH_set_buffer_grid.o IH_get_for_gm.o IH_get_for_oh.o IH_get_for_sc.o IH_get_for_sp.o IH_put_from_oh.o IH_wrapper.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libIH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/BATSRUS' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIM.a IM_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libLA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libLA.a LA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libLA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libOH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libOH.a OH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libOH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPS.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPS.a PS_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPW.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPW.a PW_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPW.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libRB.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libRB.a RB_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libRB.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSize.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModSingleFluid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModExtraVariables.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src 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-c -w -r8 -O3 ModPointImplicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModMultiIon.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCharacteristic.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModCurrent.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 ModFaceValue.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src 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-r8 -O3 amr_criteria.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 amr_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_gradients.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_sources.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 calc_timestep.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 coarsen_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 covariant.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 create_soln_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 exchange_messages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 explicit.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 find_neighbors.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 fix_axis_cells.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 library.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 load_balance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_faces.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 message_pass_nodes.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 number_blocks.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 octree.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 potential_force_averages.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 refine_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 rotate.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_b0.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_block_geometry.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_ICs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_outer_BCs.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 set_physics.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 specify_refinement.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 update_states_MHD.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_logfile.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_common.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_idl.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_tec.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_los.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_sph.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_plot_radiowave.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I/nobackup/gtoth/Tmp/SWMF/util/CRASH/src -c -w -r8 -O3 write_progress.f90 rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/srcInterface' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 ModBuffer.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 ModGridDescriptor.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 SC_get_for_ih.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 SC_get_for_sp.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 SC_inquire_if_spherical.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 SC_put_from_ih.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 SC_wrapper.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 update_lagrangian_grid.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 ModDensityAndGradient.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 ModRadioWaveRaytracing.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE -I../src -c -w -r8 -O3 ModRadioWaveImage.f90 cp -f ../src/libBATSRUS.a /nobackup/gtoth/Tmp/SWMF/lib/libSC.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSC.a ModBuffer.o ModGridDescriptor.o SC_get_for_ih.o SC_get_for_sp.o SC_inquire_if_spherical.o SC_put_from_ih.o SC_wrapper.o update_lagrangian_grid.o ModDensityAndGradient.o ModRadioWaveImage.o ModRadioWaveRaytracing.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libSC.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/BATSRUS' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSP.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSP.a SP_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSP.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libUA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libUA.a UA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a CON_couple_gm_ie.o CON_couple_ih_gm.o CON_couple_gm_im.o CON_couple_ie_im.o CON_couple_ie_ua.o CON_couple_ih_oh.o CON_couple_ih_sc.o CON_couple_mh_sp.o CON_couple_gm_rb.o CON_couple_ie_pw.o CON_couple_gm_pw.o CON_couple_ie_ps.o CON_couple_ie_rb.o CON_wrapper.o CON_couple_all.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `/nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a has been brought up to date. rm -rf Tmp_* mkdir Tmp_SHARE; cd Tmp_SHARE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a mkdir Tmp_TIMING; cd Tmp_TIMING; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a mkdir Tmp_INDICES; cd Tmp_INDICES; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a mkdir Tmp_MAGNETOGRAM; cd Tmp_MAGNETOGRAM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a mkdir Tmp_EMPIRICALEE; cd Tmp_EMPIRICALEE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a mkdir Tmp_EMPIRICALGM; cd Tmp_EMPIRICALGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a mkdir Tmp_EMPIRICALIE; cd Tmp_EMPIRICALIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a mkdir Tmp_EMPIRICALUA; cd Tmp_EMPIRICALUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a mkdir Tmp_LIBRARY; cd Tmp_LIBRARY; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a mkdir Tmp_COUPLER; cd Tmp_COUPLER; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a mkdir Tmp_INTERFACE; cd Tmp_INTERFACE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a mkdir Tmp_CONTROL; cd Tmp_CONTROL; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a mkdir Tmp_LIBGM; cd Tmp_LIBGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libGM.a #^CMP IF GM mkdir Tmp_LIBIE; cd Tmp_LIBIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIE.a #^CMP IF IE mkdir Tmp_LIBIH; cd Tmp_LIBIH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIH.a #^CMP IF IH mkdir Tmp_LIBIM; cd Tmp_LIBIM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIM.a #^CMP IF IM mkdir Tmp_LIBLA; cd Tmp_LIBLA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLA.a #^CMP IF LA mkdir Tmp_LIBOH; cd Tmp_LIBOH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libOH.a #^CMP IF OH mkdir Tmp_LIBPS; cd Tmp_LIBPS; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPS.a #^CMP IF PS mkdir Tmp_LIBPW; cd Tmp_LIBPW; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPW.a #^CMP IF PW mkdir Tmp_LIBRB; cd Tmp_LIBRB; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libRB.a #^CMP IF RB mkdir Tmp_LIBSC; cd Tmp_LIBSC; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSC.a #^CMP IF SC mkdir Tmp_LIBSP; cd Tmp_LIBSP; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSP.a #^CMP IF SP mkdir Tmp_LIBUA; cd Tmp_LIBUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libUA.a #^CMP IF UA make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `swmf.o' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/SWMF.exe swmf.o Tmp_*/*.o -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[4]: *** [SWMFEXE] Error 1 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[3]: *** [SWMF] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[2]: *** [test2_compile] Error 2 make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[1]: *** [test2] Error 2 make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make: [test] Error 2 (ignored) make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make test3_compile make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF' ./Config.pl -v=Empty,GM/BATSRUS,IE/Ridley_serial,IM/RCM2 Modifying versions in Makefile.def ./Config.pl -g=GM:8,8,8,400,100 -o=GM:u=Default,e=Mhd make SWMF PIDL make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a ModTiming.o timing_cpu.o timing.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libGM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' cp -f ../src/libBATSRUS.a /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ModGridDescriptor.o ModBuffer.o GM_put_from_ih_buffer.o GM_wrapper.o update_lagrangian_grid.o ModDensityAndGradient.o ModRadioWaveImage.o ModRadioWaveRaytracing.o GM_put_from_ih.o ModGmImCoupling.o GM_get_for_im.o GM_put_from_im.o ModGmRbCoupling.o GM_get_for_rb.o GM_get_for_ie.o GM_put_from_ie.o ModIeGrid.o GM_get_for_pw.o GM_put_from_pw.o ModPwGrid.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libGM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ModSize.o IE_ModMain.o IE_ModIo.o ModIonosphere.o ModProcIE.o ModIE_Interface.o ModFiles.o ModConductance.o IE_solve.o IE_wrapper.o IE_Initialize.o IE_Library.o IE_gather.o iono_conductances.o iono_currents.o iono_joule.o iono_solver.o Create_Region2_Currents.o ionosphere.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' /nobackup/gtoth/Tmp/SWMF/lib/libIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/Ridley_serial' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIH.a IH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2/src' Makefile:78: warning: overriding commands for target `.f90.o' ../../../Makefile.conf:66: warning: ignoring old commands for target `.f90.o' Makefile:81: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' cd claw; make lib make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2/src/claw' Makefile:36: warning: overriding commands for target `.f.o' ../../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save qinit.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save rpn2ad1.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save rpt2ad1.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save b4step2.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save setaux.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save psi.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save claw2ez.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save bc2.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save claw2.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save step2.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save step2ds.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save dimsp2.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save flux2.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save copyq2.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save limiter.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save philim.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -c -w -save src2.f make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2/src/claw' make /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2/src' Makefile:78: warning: overriding commands for target `.f90.o' ../../../Makefile.conf:66: warning: ignoring old commands for target `.f90.o' Makefile:81: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save ModProcIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save rcm_variables.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save rcm_io.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save rcm_routines.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save rcm_comput.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save gmresm.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save rcm_efield.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save impl_bicgstab.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save gamma.f f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save -r8 IM_wrapper.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -c -w -save RCM_advec.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIM.a claw/qinit.o claw/rpn2ad1.o claw/rpt2ad1.o claw/b4step2.o claw/setaux.o claw/psi.o claw/claw2ez.o claw/bc2.o claw/claw2.o claw/step2.o claw/step2ds.o claw/dimsp2.o claw/flux2.o claw/copyq2.o claw/limiter.o claw/philim.o claw/src2.o ModProcIM.o rcm_variables.o rcm_io.o rcm_routines.o rcm_comput.o gmresm.o rcm_efield.o impl_bicgstab.o gamma.o IM_wrapper.o RCM_advec.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2/src' /nobackup/gtoth/Tmp/SWMF/lib/libIM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/RCM2' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libLA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libLA.a LA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libLA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libOH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libOH.a OH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libOH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPS.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPS.a PS_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPW.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPW.a PW_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPW.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libRB.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libRB.a RB_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libRB.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSC.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSC.a SC_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSC.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSP.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSP.a SP_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSP.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libUA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libUA.a UA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a CON_couple_gm_ie.o CON_couple_ih_gm.o CON_couple_gm_im.o CON_couple_ie_im.o CON_couple_ie_ua.o CON_couple_ih_oh.o CON_couple_ih_sc.o CON_couple_mh_sp.o CON_couple_gm_rb.o CON_couple_ie_pw.o CON_couple_gm_pw.o CON_couple_ie_ps.o CON_couple_ie_rb.o CON_wrapper.o CON_couple_all.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `/nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a has been brought up to date. rm -rf Tmp_* mkdir Tmp_SHARE; cd Tmp_SHARE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a mkdir Tmp_TIMING; cd Tmp_TIMING; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a mkdir Tmp_INDICES; cd Tmp_INDICES; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a mkdir Tmp_MAGNETOGRAM; cd Tmp_MAGNETOGRAM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a mkdir Tmp_EMPIRICALEE; cd Tmp_EMPIRICALEE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a mkdir Tmp_EMPIRICALGM; cd Tmp_EMPIRICALGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a mkdir Tmp_EMPIRICALIE; cd Tmp_EMPIRICALIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a mkdir Tmp_EMPIRICALUA; cd Tmp_EMPIRICALUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a mkdir Tmp_LIBRARY; cd Tmp_LIBRARY; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a mkdir Tmp_COUPLER; cd Tmp_COUPLER; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a mkdir Tmp_INTERFACE; cd Tmp_INTERFACE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a mkdir Tmp_CONTROL; cd Tmp_CONTROL; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a mkdir Tmp_LIBGM; cd Tmp_LIBGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libGM.a #^CMP IF GM mkdir Tmp_LIBIE; cd Tmp_LIBIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIE.a #^CMP IF IE mkdir Tmp_LIBIH; cd Tmp_LIBIH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIH.a #^CMP IF IH mkdir Tmp_LIBIM; cd Tmp_LIBIM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIM.a #^CMP IF IM mkdir Tmp_LIBLA; cd Tmp_LIBLA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLA.a #^CMP IF LA mkdir Tmp_LIBOH; cd Tmp_LIBOH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libOH.a #^CMP IF OH mkdir Tmp_LIBPS; cd Tmp_LIBPS; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPS.a #^CMP IF PS mkdir Tmp_LIBPW; cd Tmp_LIBPW; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPW.a #^CMP IF PW mkdir Tmp_LIBRB; cd Tmp_LIBRB; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libRB.a #^CMP IF RB mkdir Tmp_LIBSC; cd Tmp_LIBSC; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSC.a #^CMP IF SC mkdir Tmp_LIBSP; cd Tmp_LIBSP; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSP.a #^CMP IF SP mkdir Tmp_LIBUA; cd Tmp_LIBUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libUA.a #^CMP IF UA make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `swmf.o' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/SWMF.exe swmf.o Tmp_*/*.o -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[4]: *** [SWMFEXE] Error 1 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[3]: *** [SWMF] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[2]: *** [test3_compile] Error 2 make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[1]: *** [test3] Error 2 make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make: [test] Error 2 (ignored) make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make test4_compile make[2]: Entering directory `/nobackup/gtoth/Tmp/SWMF' ./Config.pl -v=Empty,GM/BATSRUS,IE/RIM,IM/HEIDI Modifying versions in Makefile.def ./Config.pl -g=GM:8,8,8,400,100 -o=GM:u=Default,e=Mhd make SWMF PIDL make[3]: Entering directory `/nobackup/gtoth/Tmp/SWMF' make[4]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a ModTiming.o timing_cpu.o timing.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcMagnetogram' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcEE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcUA' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Library/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[6]: `/nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a' is up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' make libBATSRUS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' rm -f libBATSRUS.a ar -rs libBATSRUS.a ModAdvance.o ModAMR.o ModB0.o ModBlockData.o ModBoundaryCells.o ModConserveFlux.o ModCube.o ModIonoVelocity.o ModExtraVariables.o ModSingleFluid.o ModMultiFluid.o ModMultiIon.o ModEnergy.o ModEquation.o ModCharacteristic.o ModCovariant.o ModCurrent.o ModExpansionFactors.o ModFaceFlux.o ModFaceGradient.o ModFaceValue.o ModGeometry.o ModGroundMagPerturb.o ModHallResist.o ModIO.o ModMain.o ModMessagePass.o ModNodes.o ModOctree.o ModParallel.o ModPartSteady.o ModPhysics.o ModPointImplicit.o ModPolarNeighbor.o ModProcMH.o ModRestartFile.o ModSatelliteFile.o ModSize.o ModSolarwind.o ModTemperature.o ModTimeStepControl.o ModUserEmpty.o ModUser.o ModWaves.o ModCT.o ModImplicit.o ModRadDiffusion.o ModHeatConduction.o ModRaytrace.o ModProject.o BATS_methods.o MH_set_parameters.o advect_points.o allocate_vars.o amr.o amr_criteria.o amr_physics.o calc_gradients.o calc_sources.o calc_timestep.o coarsen_grid.o covariant.o create_soln_blocks.o exchange_messages.o explicit.o find_neighbors.o fix_axis_cells.o library.o load_balance.o message_pass_cells.o message_pass_faces.o message_pass_nodes.o number_blocks.o octree.o potential_force_averages.o refine_grid.o rotate.o set_b0.o set_BCs.o set_block_geometry.o set_ICs.o set_outer_BCs.o set_physics.o specify_refinement.o update_states.o update_states_MHD.o write_logfile.o write_plot_common.o write_plot_idl.o write_plot_tec.o write_plot_los.o write_plot_sph.o write_plot_radiowave.o write_progress.o constrain_B.o implicit.o impl_interface.o impl_jacobian.o impl_matvec.o impl_newton.o ray_trace_new.o ray_trace.o ray_pass.o get_im_pressure.o project_B.o proj_cg.o proj_bicgstab.o calc_heat_flux.o set_resistivity.o ModResistivity.o clean_divb.o ar: creating libBATSRUS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' libBATSRUS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/src' cd srcInterface; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libGM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' cp -f ../src/libBATSRUS.a /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libGM.a ModGridDescriptor.o ModBuffer.o GM_put_from_ih_buffer.o GM_wrapper.o update_lagrangian_grid.o ModDensityAndGradient.o ModRadioWaveImage.o ModRadioWaveRaytracing.o GM_put_from_ih.o ModGmImCoupling.o GM_get_for_im.o GM_put_from_im.o ModGmRbCoupling.o GM_get_for_rb.o GM_get_for_ie.o GM_put_from_ie.o ModIeGrid.o GM_get_for_pw.o GM_put_from_pw.o ModPwGrid.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libGM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/GM/BATSRUS' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM/src' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModProcIE.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModSizeRIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModRIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModIoRIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModParamRIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModFiles.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 ModIEInterface.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 IE_wrapper.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 init_RIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 stop_RIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 advance_RIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 get_conductance.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 conductance_gradients.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 solve.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 set_imf.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 gather.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 distribute.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 write_output_RIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 calc_aurora.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 IE_couplers.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 logfileRIM.f90 f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/util/DATAREAD/srcIndices -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -c -w -r8 -O3 set_test.f90 rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIE.a ModProcIE.o ModSizeRIM.o ModRIM.o ModIoRIM.o ModParamRIM.o ModFiles.o ModIEInterface.o IE_wrapper.o init_RIM.o stop_RIM.o advance_RIM.o get_conductance.o conductance_gradients.o solve.o set_imf.o gather.o distribute.o write_output_RIM.o calc_aurora.o IE_couplers.o logfileRIM.o set_test.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIE.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM/src' /nobackup/gtoth/Tmp/SWMF/lib/libIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IE/RIM' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libIH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIH.a IH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libIH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libIH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' touch src/Makefile.DEPEND src/Makefile.RULES srcInterface/Makefile.DEPEND make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/share/Library/src' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' make /nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' /nobackup/gtoth/Tmp/SWMF/lib/libNOMPI.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/NOMPI/src' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/TIMING/src' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' Makefile:22: warning: overriding commands for target `.f.o' ../../../Makefile.conf:72: warning: ignoring old commands for target `.f.o' make[7]: `/nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a' is up to date. make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcGM' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/src' make libHEIDI.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/src' rm -f libHEIDI.a ar -rs libHEIDI.a ModHeidiSize.o ModHeidiMain.o ModHeidiCurrents.o ModHeidiDGCPM.o ModHeidiDrifts.o ModHeidiIO.o ModHeidiWaves.o ModInit.o ModIonoHeidi.o ModHeidiSatellites.o ModProcIM.o ModHeidiInput.o ModHeidiBField.o ModHeidiNeutralH.o heidi_setup.o heidi_icbc.o heidi_coefficients.o heidi_operators.o heidi_currents.o heidi_output.o heidi_waves.o recipes.o pbo.o wgrdar.o get_potential.o heidi_check.o heidi_init.o heidi_run.o read_ring_current.o write_ring_current.o epencalc.o iono_init.o ar: creating libHEIDI.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/src' libHEIDI.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/src' make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/srcInterface' make /nobackup/gtoth/Tmp/SWMF/lib/libIM.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/srcInterface' f95 -I/nobackup/gtoth/Tmp/SWMF/share/Library/src -I/nobackup/gtoth/Tmp/SWMF/CON/Coupler/src -I/nobackup/gtoth/Tmp/SWMF/CON/Library/src -I/nobackup/gtoth/Tmp/SWMF/util/EMPIRICAL/srcIE -I../src -c -w -r8 -O3 IM_wrapper.f90 cp -f ../src/libHEIDI.a /nobackup/gtoth/Tmp/SWMF/lib/libIM.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libIM.a IM_wrapper.o make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/srcInterface' /nobackup/gtoth/Tmp/SWMF/lib/libIM.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI/srcInterface' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/IM/HEIDI' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libLA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libLA.a LA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libLA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libLA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/LA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libOH.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libOH.a OH_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libOH.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libOH.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/OH/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPS.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPS.a PS_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPS.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPS.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PS/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libPW.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libPW.a PW_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libPW.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libPW.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/PW/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libRB.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libRB.a RB_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libRB.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libRB.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/RB/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSC.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSC.a SC_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSC.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSC.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SC/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libSP.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libSP.a SP_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libSP.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libSP.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/SP/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' cd src; make LIB make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Entering directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libUA.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libUA.a UA_wrapper.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libUA.a make[7]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' /nobackup/gtoth/Tmp/SWMF/lib/libUA.a has been brought up to date. make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/UA/Empty' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' rm -f /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a ar -rs /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a CON_couple_gm_ie.o CON_couple_ih_gm.o CON_couple_gm_im.o CON_couple_ie_im.o CON_couple_ie_ua.o CON_couple_ih_oh.o CON_couple_ih_sc.o CON_couple_mh_sp.o CON_couple_gm_rb.o CON_couple_ie_pw.o CON_couple_gm_pw.o CON_couple_ie_ps.o CON_couple_ie_rb.o CON_wrapper.o CON_couple_all.o ar: creating /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a make[6]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a has been brought up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Interface/src' make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `/nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a has been brought up to date. rm -rf Tmp_* mkdir Tmp_SHARE; cd Tmp_SHARE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSHARE.a mkdir Tmp_TIMING; cd Tmp_TIMING; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libTIMING.a mkdir Tmp_INDICES; cd Tmp_INDICES; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINDICES.a mkdir Tmp_MAGNETOGRAM; cd Tmp_MAGNETOGRAM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libMAGNETOGRAM.a mkdir Tmp_EMPIRICALEE; cd Tmp_EMPIRICALEE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALEE.a mkdir Tmp_EMPIRICALGM; cd Tmp_EMPIRICALGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALGM.a mkdir Tmp_EMPIRICALIE; cd Tmp_EMPIRICALIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALIE.a mkdir Tmp_EMPIRICALUA; cd Tmp_EMPIRICALUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libEMPIRICALUA.a mkdir Tmp_LIBRARY; cd Tmp_LIBRARY; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLIBRARY.a mkdir Tmp_COUPLER; cd Tmp_COUPLER; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCOUPLER.a mkdir Tmp_INTERFACE; cd Tmp_INTERFACE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libINTERFACE.a mkdir Tmp_CONTROL; cd Tmp_CONTROL; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libCONTROL.a mkdir Tmp_LIBGM; cd Tmp_LIBGM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libGM.a #^CMP IF GM mkdir Tmp_LIBIE; cd Tmp_LIBIE; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIE.a #^CMP IF IE mkdir Tmp_LIBIH; cd Tmp_LIBIH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIH.a #^CMP IF IH mkdir Tmp_LIBIM; cd Tmp_LIBIM; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libIM.a #^CMP IF IM mkdir Tmp_LIBLA; cd Tmp_LIBLA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libLA.a #^CMP IF LA mkdir Tmp_LIBOH; cd Tmp_LIBOH; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libOH.a #^CMP IF OH mkdir Tmp_LIBPS; cd Tmp_LIBPS; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPS.a #^CMP IF PS mkdir Tmp_LIBPW; cd Tmp_LIBPW; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libPW.a #^CMP IF PW mkdir Tmp_LIBRB; cd Tmp_LIBRB; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libRB.a #^CMP IF RB mkdir Tmp_LIBSC; cd Tmp_LIBSC; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSC.a #^CMP IF SC mkdir Tmp_LIBSP; cd Tmp_LIBSP; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libSP.a #^CMP IF SP mkdir Tmp_LIBUA; cd Tmp_LIBUA; ar -x /nobackup/gtoth/Tmp/SWMF/lib/libUA.a #^CMP IF UA make[5]: Entering directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[5]: `swmf.o' is up to date. make[5]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' mpif90 -o /nobackup/gtoth/Tmp/SWMF/bin/SWMF.exe swmf.o Tmp_*/*.o -r8 -Bstatic /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(dlopen.o): In function `vm_open': dlopen.c:(.text+0x133): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `setup_launch': plm_rsh_module.c:(.text+0x5a3): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_component.o): In function `mca_btl_tcp_component_create_listen': btl_tcp_component.c:(.text+0x108): warning: Using 'getaddrinfo' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/local/torque/lib/libtorque.a(tm.o): In function `startcom': (.text+0x32d): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_any': req_wait.c:(.text+0xf7): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x106): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x16e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x17d): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_some': req_wait.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x32d): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x42f): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x43e): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait': req_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x5d9): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x5e8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(req_wait.o): In function `ompi_request_default_wait_all': req_wait.c:(.text+0x7e6): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x7f5): undefined reference to `pthread_mutex_lock' req_wait.c:(.text+0x81d): undefined reference to `pthread_mutex_unlock' req_wait.c:(.text+0x82c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_mpi_init.o): In function `ompi_warn_fork': ompi_mpi_init.c:(.text+0x2a): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_free': allocator_basic.c:(.text+0x243): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x25a): undefined reference to `pthread_mutex_unlock' allocator_basic.c:(.text+0x2e1): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x2f8): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(allocator_basic.o): In function `mca_allocator_basic_alloc': allocator_basic.c:(.text+0x547): undefined reference to `pthread_mutex_lock' allocator_basic.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_base_tree.o): In function `mca_mpool_base_tree_item_get': mpool_base_tree.c:(.text+0x313): undefined reference to `pthread_mutex_lock' mpool_base_tree.c:(.text+0x32e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_component.o): In function `ompi_osc_rdma_component_select': osc_rdma_component.c:(.text+0x1ee4): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1ef1): undefined reference to `pthread_mutex_lock' osc_rdma_component.c:(.text+0x1f3b): undefined reference to `pthread_mutex_unlock' osc_rdma_component.c:(.text+0x1f48): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_send_cb': osc_rdma_data_move.c:(.text+0xca3): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0xcf1): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_accum': osc_rdma_data_move.c:(.text+0x1c42): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x1c90): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_recv_put': osc_rdma_data_move.c:(.text+0x203f): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x20ab): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_replyreq_recv': osc_rdma_data_move.c:(.text+0x297d): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x29cb): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_data_move.o): In function `ompi_osc_rdma_sendreq_send_cb': osc_rdma_data_move.c:(.text+0x3098): undefined reference to `pthread_mutex_lock' osc_rdma_data_move.c:(.text+0x3104): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_replyreq.o): In function `ompi_osc_rdma_replyreq_alloc_init': osc_rdma_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_rdma_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sendreq.o): In function `ompi_osc_rdma_sendreq_alloc_init': osc_rdma_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_rdma_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_unlock': osc_rdma_sync.c:(.text+0xb07): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xb14): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xb94): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xba1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbc2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xbcf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xbfa): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xc07): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_wait': osc_rdma_sync.c:(.text+0xcab): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xcb8): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0xcf4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0xd01): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_complete': osc_rdma_sync.c:(.text+0x10a8): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x10b5): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1176): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1183): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11a6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11b3): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x11e4): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x11f1): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1263): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1272): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x12b6): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x12c3): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_rdma_sync.o): In function `ompi_osc_rdma_module_fence': osc_rdma_sync.c:(.text+0x1624): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1631): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x16c2): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x16cf): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1708): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1717): undefined reference to `pthread_mutex_lock' osc_rdma_sync.c:(.text+0x1738): undefined reference to `pthread_mutex_unlock' osc_rdma_sync.c:(.text+0x1745): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_component.o): In function `ompi_osc_pt2pt_component_select': osc_pt2pt_component.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' osc_pt2pt_component.c:(.text+0x149a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_component.c:(.text+0x14a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_send': osc_pt2pt_data_move.c:(.text+0x267): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2d6): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x620): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x66e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_control_send': osc_pt2pt_data_move.c:(.text+0x8dd): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x945): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_recv': osc_pt2pt_data_move.c:(.text+0x1ba9): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x1bf7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_accum': osc_pt2pt_data_move.c:(.text+0x21ac): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x21fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_sendreq_recv_put': osc_pt2pt_data_move.c:(.text+0x259b): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2607): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_data_move.o): In function `ompi_osc_pt2pt_replyreq_send': osc_pt2pt_data_move.c:(.text+0x29e6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2a56): undefined reference to `pthread_mutex_unlock' osc_pt2pt_data_move.c:(.text+0x2bc6): undefined reference to `pthread_mutex_lock' osc_pt2pt_data_move.c:(.text+0x2c14): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_replyreq.o): In function `ompi_osc_pt2pt_replyreq_alloc_init': osc_pt2pt_replyreq.c:(.text+0x2b6): undefined reference to `pthread_mutex_lock' osc_pt2pt_replyreq.c:(.text+0x31e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sendreq.o): In function `ompi_osc_pt2pt_sendreq_alloc_init': osc_pt2pt_sendreq.c:(.text+0x346): undefined reference to `pthread_mutex_lock' osc_pt2pt_sendreq.c:(.text+0x3ae): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_wait': osc_pt2pt_sync.c:(.text+0x3fc): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x409): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x445): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x452): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_complete': osc_pt2pt_sync.c:(.text+0xc98): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xca5): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xd74): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xd81): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xda2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xdaf): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0xdda): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0xde7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_fence': osc_pt2pt_sync.c:(.text+0x102a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1037): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x1093): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x10a2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(osc_pt2pt_sync.o): In function `ompi_osc_pt2pt_module_unlock': osc_pt2pt_sync.c:(.text+0x1334): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1341): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13b4): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13c1): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x13e2): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x13ef): undefined reference to `pthread_mutex_lock' osc_pt2pt_sync.c:(.text+0x141a): undefined reference to `pthread_mutex_unlock' osc_pt2pt_sync.c:(.text+0x1427): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_base_bsend.o): In function `mca_pml_base_bsend_detach': pml_base_bsend.c:(.text+0x396): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x3a5): undefined reference to `pthread_mutex_lock' pml_base_bsend.c:(.text+0x489): undefined reference to `pthread_mutex_unlock' pml_base_bsend.c:(.text+0x498): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_insert': ompi_rb_tree.c:(.text+0x832): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0x846): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(ompi_rb_tree.o): In function `ompi_rb_tree_init': ompi_rb_tree.c:(.text+0xa0d): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa21): undefined reference to `pthread_mutex_unlock' ompi_rb_tree.c:(.text+0xa74): undefined reference to `pthread_mutex_lock' ompi_rb_tree.c:(.text+0xa88): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp_endpoint.o): In function `mca_btl_tcp_endpoint_recv_handler': btl_tcp_endpoint.c:(.text+0x904): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x91f): undefined reference to `pthread_mutex_unlock' btl_tcp_endpoint.c:(.text+0x9d9): undefined reference to `pthread_mutex_lock' btl_tcp_endpoint.c:(.text+0x9f4): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_component_close': btl_openib_component.c:(.text+0x7b5): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `prepare_device_for_use': btl_openib_component.c:(.text+0x134a): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `mca_btl_openib_post_srr': btl_openib_component.c:(.text+0x1684): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1691): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x17e4): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x17f1): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x1829): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x1836): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_component.o): In function `btl_openib_handle_incoming': btl_openib_component.c:(.text+0x4f6b): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x4f78): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x51ed): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x51fa): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5662): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x566f): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x56bf): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x56cc): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5804): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5816): undefined reference to `pthread_mutex_lock' btl_openib_component.c:(.text+0x5831): undefined reference to `pthread_mutex_unlock' btl_openib_component.c:(.text+0x5843): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_connect_eager_rdma': btl_openib_endpoint.c:(.text+0x1efc): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1f09): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x1fbd): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x1fca): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x200f): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x201c): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_cts': btl_openib_endpoint.c:(.text+0x21c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x21d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2264): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2271): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2389): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2396): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_send_credits': btl_openib_endpoint.c:(.text+0x2926): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2935): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x29c1): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x29d0): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2a38): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2a47): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_endpoint.o): In function `mca_btl_openib_endpoint_post_recvs': btl_openib_endpoint.c:(.text+0x2d26): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2d33): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x2f34): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x2f41): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x31c4): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x31d1): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x3209): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3216): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x325a): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x3267): undefined reference to `pthread_mutex_lock' btl_openib_endpoint.c:(.text+0x329c): undefined reference to `pthread_mutex_unlock' btl_openib_endpoint.c:(.text+0x32a9): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_async.o): In function `btl_openib_async_thread': btl_openib_async.c:(.text+0x57a): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0x7ce): undefined reference to `pthread_exit' btl_openib_async.c:(.text+0xcba): undefined reference to `pthread_exit' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_init': btl_openib_fd.c:(.text+0x2be): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib_fd.o): In function `ompi_btl_openib_fd_finalize': btl_openib_fd.c:(.text+0x3bc): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm_component.o): In function `btl_sm_add_pending': btl_sm_component.c:(.text+0x16e): undefined reference to `pthread_mutex_lock' btl_sm_component.c:(.text+0x1d6): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(io_base_request.o): In function `mca_io_base_request_alloc': io_base_request.c:(.text+0x40e): undefined reference to `pthread_mutex_lock' io_base_request.c:(.text+0x429): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `register_cache_bypass': mpool_rdma_module.c:(.text+0x357): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0x36e): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(mpool_rdma_module.o): In function `mca_mpool_rdma_register': mpool_rdma_module.c:(.text+0xe4b): undefined reference to `pthread_mutex_lock' mpool_rdma_module.c:(.text+0xe62): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_irecv': vprotocol_pessimist_recv.c:(.text+0x1cd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x1dc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x2dd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x2ec): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x352): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x361): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x392): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x3a1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_recv.o): In function `mca_vprotocol_pessimist_recv': vprotocol_pessimist_recv.c:(.text+0x5ad): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x5bc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x6bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x6cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x732): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x741): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_recv.c:(.text+0x781): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test': vprotocol_pessimist_wait.c:(.text+0x386): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x395): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x3bd): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x3cc): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x516): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x525): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x598): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x5a7): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x627): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x636): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x6c9): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x6d8): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x75e): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x76d): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x7d3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x7e2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x807): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x816): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x869): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x878): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x89d): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x8ac): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x918): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x927): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_wait_any': vprotocol_pessimist_wait.c:(.text+0xb16): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xb25): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xc66): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xc75): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xcdb): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xcea): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(libmca_vprotocol_pessimist_la-vprotocol_pessimist_wait.o): In function `mca_vprotocol_pessimist_test_any': vprotocol_pessimist_wait.c:(.text+0xfa3): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0xfb2): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1146): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1155): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1286): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1295): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x12c7): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x12d6): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x1372): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x1381): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x13c6): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x13d5): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x143b): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x144a): undefined reference to `pthread_mutex_lock' vprotocol_pessimist_wait.c:(.text+0x14a0): undefined reference to `pthread_mutex_unlock' vprotocol_pessimist_wait.c:(.text+0x14af): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1.o): In function `mca_pml_ob1_send_fin': pml_ob1.c:(.text+0x10de): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x10ed): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1179): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1188): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x11fb): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x120a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1279): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1288): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x12ca): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x12d9): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x1375): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x1384): undefined reference to `pthread_mutex_lock' pml_ob1.c:(.text+0x13a2): undefined reference to `pthread_mutex_unlock' pml_ob1.c:(.text+0x13b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_iprobe.o): In function `mca_pml_ob1_probe': pml_ob1_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_ob1_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_ob1_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv_init': pml_ob1_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_irecv': pml_ob1_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_irecv.o): In function `mca_pml_ob1_recv': pml_ob1_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_ob1_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_ob1_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend': pml_ob1_isend.c:(.text+0x416): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x425): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x487): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x496): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_isend_init': pml_ob1_isend.c:(.text+0x9c7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x9d6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xa36): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xa45): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaaf): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xabe): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0xaef): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0xafe): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_isend.o): In function `mca_pml_ob1_send': pml_ob1_isend.c:(.text+0x102d): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x103c): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x10b6): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x10c5): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x1266): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x1275): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x12d7): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x12e6): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x137b): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x138a): undefined reference to `pthread_mutex_lock' pml_ob1_isend.c:(.text+0x14ad): undefined reference to `pthread_mutex_unlock' pml_ob1_isend.c:(.text+0x14bc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvfrag.o): In function `append_frag_to_list': pml_ob1_recvfrag.c:(.text+0x80c): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x81b): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x956): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x965): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0x9cb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0x9da): undefined reference to `pthread_mutex_lock' pml_ob1_recvfrag.c:(.text+0xa0b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvfrag.c:(.text+0xa1a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_ack': pml_ob1_recvreq.c:(.text+0xe22): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xe31): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xec6): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xed5): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf3b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf4a): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0xf7b): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0xf8a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_recvreq.o): In function `mca_pml_ob1_recv_request_progress_rget': pml_ob1_recvreq.c:(.text+0x1964): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1973): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1a4e): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1a5d): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1ae9): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1af8): undefined reference to `pthread_mutex_lock' pml_ob1_recvreq.c:(.text+0x1bbb): undefined reference to `pthread_mutex_unlock' pml_ob1_recvreq.c:(.text+0x1bca): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_copy_in_out': pml_ob1_sendreq.c:(.text+0x9e6): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x9f5): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xa60): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xa6f): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xad9): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xae8): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0xbb1): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0xbc0): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_ob1_sendreq.o): In function `mca_pml_ob1_send_request_put': pml_ob1_sendreq.c:(.text+0x1486): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1495): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x150b): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x151a): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1589): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1598): undefined reference to `pthread_mutex_lock' pml_ob1_sendreq.c:(.text+0x1646): undefined reference to `pthread_mutex_unlock' pml_ob1_sendreq.c:(.text+0x1655): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum.o): In function `mca_pml_csum_send_fin': pml_csum.c:(.text+0x1226): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1235): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x12b2): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x12c1): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x135d): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x136c): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1391): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13a0): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x13e6): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x13f5): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x14ac): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x14bb): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1526): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1535): undefined reference to `pthread_mutex_lock' pml_csum.c:(.text+0x1553): undefined reference to `pthread_mutex_unlock' pml_csum.c:(.text+0x1562): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_iprobe.o): In function `mca_pml_csum_probe': pml_csum_iprobe.c:(.text+0x176): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x185): undefined reference to `pthread_mutex_lock' pml_csum_iprobe.c:(.text+0x319): undefined reference to `pthread_mutex_unlock' pml_csum_iprobe.c:(.text+0x328): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv_init': pml_csum_irecv.c:(.text+0x132): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x14d): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_irecv': pml_csum_irecv.c:(.text+0x2f5): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x310): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_irecv.o): In function `mca_pml_csum_recv': pml_csum_irecv.c:(.text+0x507): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x516): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5c0): undefined reference to `pthread_mutex_unlock' pml_csum_irecv.c:(.text+0x5cf): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x5e7): undefined reference to `pthread_mutex_lock' pml_csum_irecv.c:(.text+0x602): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend': pml_csum_isend.c:(.text+0x41b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x42a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x48c): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x49b): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x55f): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x56e): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x6a2): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x6b1): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_isend_init': pml_csum_isend.c:(.text+0x9cc): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x9db): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xa39): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xa48): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xab9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xac8): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0xaf9): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0xb08): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_isend.o): In function `mca_pml_csum_send': pml_csum_isend.c:(.text+0x103d): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x104c): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x10c6): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x10d5): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x127a): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x1289): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x12eb): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x12fa): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x138b): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x139a): undefined reference to `pthread_mutex_lock' pml_csum_isend.c:(.text+0x14bd): undefined reference to `pthread_mutex_unlock' pml_csum_isend.c:(.text+0x14cc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvfrag.o): In function `append_frag_to_list': pml_csum_recvfrag.c:(.text+0xb5c): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xb6b): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xca6): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xcb5): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd1b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd2a): undefined reference to `pthread_mutex_lock' pml_csum_recvfrag.c:(.text+0xd5b): undefined reference to `pthread_mutex_unlock' pml_csum_recvfrag.c:(.text+0xd6a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_ack': pml_csum_recvreq.c:(.text+0x1157): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1166): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x129c): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x12ab): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1311): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1320): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1376): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1385): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_recvreq.o): In function `mca_pml_csum_recv_request_progress_rget': pml_csum_recvreq.c:(.text+0x1d8f): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1d9e): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1e79): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1e88): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1f16): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1f25): undefined reference to `pthread_mutex_lock' pml_csum_recvreq.c:(.text+0x1fe8): undefined reference to `pthread_mutex_unlock' pml_csum_recvreq.c:(.text+0x1ff7): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_copy_in_out': pml_csum_sendreq.c:(.text+0xa76): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xa85): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xaf0): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xaff): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_csum_sendreq.o): In function `mca_pml_csum_send_request_put': pml_csum_sendreq.c:(.text+0x1516): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1525): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x159b): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x15aa): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x1619): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x1628): undefined reference to `pthread_mutex_lock' pml_csum_sendreq.c:(.text+0x16d6): undefined reference to `pthread_mutex_unlock' pml_csum_sendreq.c:(.text+0x16e5): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv_init': pml_cm_recv.c:(.text+0x18f): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x1aa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_irecv': pml_cm_recv.c:(.text+0x3df): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x3fa): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_recv.o): In function `mca_pml_cm_recv': pml_cm_recv.c:(.text+0x533): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x54e): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8e7): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x8f6): undefined reference to `pthread_mutex_lock' pml_cm_recv.c:(.text+0x94a): undefined reference to `pthread_mutex_unlock' pml_cm_recv.c:(.text+0x959): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend_init': pml_cm_send.c:(.text+0x2bc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x2cb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x329): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x338): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3a9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3b8): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x3e9): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x3f8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_isend': pml_cm_send.c:(.text+0x986): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x995): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xa08): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xa17): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xae7): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xaf6): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xb69): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xb78): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xbcc): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xbdb): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc41): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc50): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xc75): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xc84): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0xccb): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0xcda): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(pml_cm_send.o): In function `mca_pml_cm_send': pml_cm_send.c:(.text+0x1696): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x16a5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1713): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1722): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x17d6): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x17e5): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1858): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1867): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1966): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1975): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x19e8): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x19f7): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1a46): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1a55): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1acf): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1ade): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1b23): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1b32): undefined reference to `pthread_mutex_lock' pml_cm_send.c:(.text+0x1bad): undefined reference to `pthread_mutex_unlock' pml_cm_send.c:(.text+0x1bbc): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_alloc': btl_tcp.c:(.text+0x639): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x654): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0x698): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x6b3): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_dst': btl_tcp.c:(.text+0x7d5): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0x7f0): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_tcp.o): In function `mca_btl_tcp_prepare_src': btl_tcp.c:(.text+0xa6a): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xa85): undefined reference to `pthread_mutex_unlock' btl_tcp.c:(.text+0xc21): undefined reference to `pthread_mutex_lock' btl_tcp.c:(.text+0xc3c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_dst': btl_openib.c:(.text+0x51f): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x53a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_alloc': btl_openib.c:(.text+0x95e): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x995): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0xd09): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0xd24): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_openib.o): In function `mca_btl_openib_prepare_src': btl_openib.c:(.text+0x1caa): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1ce1): undefined reference to `pthread_mutex_unlock' btl_openib.c:(.text+0x1ef6): undefined reference to `pthread_mutex_lock' btl_openib.c:(.text+0x1f11): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_alloc': btl_ofud.c:(.text+0x168): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x17f): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_prepare_src': btl_ofud.c:(.text+0x574): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x58b): undefined reference to `pthread_mutex_unlock' btl_ofud.c:(.text+0x5fc): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0x613): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_ofud.o): In function `mca_btl_ud_module_init': btl_ofud.c:(.text+0xd5d): undefined reference to `pthread_mutex_lock' btl_ofud.c:(.text+0xd75): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_alloc': btl_sm.c:(.text+0xeb): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x106): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x13f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x15a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_sendi': btl_sm.c:(.text+0x415): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x430): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_sm.o): In function `mca_btl_sm_prepare_src': btl_sm.c:(.text+0x558): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x573): undefined reference to `pthread_mutex_unlock' btl_sm.c:(.text+0x66f): undefined reference to `pthread_mutex_lock' btl_sm.c:(.text+0x68a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_alloc': btl_self.c:(.text+0x2c1): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x2dc): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x31a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x335): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_dst': btl_self.c:(.text+0x45f): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x47a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libmpi.a(btl_self.o): In function `mca_btl_self_prepare_src': btl_self.c:(.text+0x6cf): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x6ea): undefined reference to `pthread_mutex_unlock' btl_self.c:(.text+0x74a): undefined reference to `pthread_mutex_lock' btl_self.c:(.text+0x765): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(orte_wait.o): In function `orte_waitpid': orte_wait.c:(.text+0xd31): undefined reference to `pthread_mutex_unlock' orte_wait.c:(.text+0xd4a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_local_jobid': name_fns.c:(.text+0x6ac): undefined reference to `pthread_key_create' name_fns.c:(.text+0x6c6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x8f3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_job_family': name_fns.c:(.text+0x95c): undefined reference to `pthread_key_create' name_fns.c:(.text+0x976): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xbb3): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_vpids': name_fns.c:(.text+0xc1c): undefined reference to `pthread_key_create' name_fns.c:(.text+0xc36): undefined reference to `pthread_getspecific' name_fns.c:(.text+0xe63): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_jobids': name_fns.c:(.text+0xecc): undefined reference to `pthread_key_create' name_fns.c:(.text+0xee6): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1123): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(name_fns.o): In function `orte_util_print_name_args': name_fns.c:(.text+0x11a0): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x1217): undefined reference to `pthread_getspecific' name_fns.c:(.text+0x13cc): undefined reference to `pthread_setspecific' name_fns.c:(.text+0x1564): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(filem_rsh_module.o): In function `orte_filem_rsh_wait': filem_rsh_module.c:(.text+0x11cb): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x11da): undefined reference to `pthread_mutex_lock' filem_rsh_module.c:(.text+0x134b): undefined reference to `pthread_mutex_unlock' filem_rsh_module.c:(.text+0x135a): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `remote_spawn': plm_rsh_module.c:(.text+0x16d8): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x16e7): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1799): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x17a8): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(plm_rsh_module.o): In function `orte_plm_rsh_launch': plm_rsh_module.c:(.text+0x1c2e): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1c3d): undefined reference to `pthread_mutex_lock' plm_rsh_module.c:(.text+0x1d93): undefined reference to `pthread_mutex_unlock' plm_rsh_module.c:(.text+0x1da2): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv': rml_oob_recv.c:(.text+0x214): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x221): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x242): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x24f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_recv.o): In function `orte_rml_oob_recv_buffer': rml_oob_recv.c:(.text+0x744): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x751): undefined reference to `pthread_mutex_lock' rml_oob_recv.c:(.text+0x772): undefined reference to `pthread_mutex_unlock' rml_oob_recv.c:(.text+0x77f): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(rml_oob_send.o): In function `orte_rml_oob_send': rml_oob_send.c:(.text+0x246): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x253): undefined reference to `pthread_mutex_lock' rml_oob_send.c:(.text+0x307): undefined reference to `pthread_mutex_unlock' rml_oob_send.c:(.text+0x314): undefined reference to `pthread_mutex_lock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_get_new_name': oob_tcp.c:(.text+0xea6): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0xf16): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_accept_thread_handler': oob_tcp.c:(.text+0x2421): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x243d): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x244c): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2467): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp.o): In function `mca_oob_tcp_listen_thread': oob_tcp.c:(.text+0x288f): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2933): undefined reference to `pthread_mutex_unlock' oob_tcp.c:(.text+0x2a26): undefined reference to `pthread_mutex_lock' oob_tcp.c:(.text+0x2a6a): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_lookup': oob_tcp_peer.c:(.text+0xbf6): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0xc44): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_peer.o): In function `mca_oob_tcp_peer_recv_handler': oob_tcp_peer.c:(.text+0x15ae): undefined reference to `pthread_mutex_lock' oob_tcp_peer.c:(.text+0x1604): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_recv.o): In function `mca_oob_tcp_recv_nb': oob_tcp_recv.c:(.text+0x3e6): undefined reference to `pthread_mutex_lock' oob_tcp_recv.c:(.text+0x43c): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-rte.a(oob_tcp_send.o): In function `mca_oob_tcp_send_nb': oob_tcp_send.c:(.text+0x26f): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x2af): undefined reference to `pthread_mutex_unlock' oob_tcp_send.c:(.text+0x33a): undefined reference to `pthread_mutex_lock' oob_tcp_send.c:(.text+0x3a7): undefined reference to `pthread_mutex_unlock' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_destruct': condition.c:(.text+0x5): undefined reference to `pthread_cond_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(condition.o): In function `opal_condition_construct': condition.c:(.text+0x25): undefined reference to `pthread_cond_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_construct': mutex.c:(.text+0x1b): undefined reference to `pthread_mutex_init' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(mutex.o): In function `opal_mutex_destruct': mutex.c:(.text+0x5): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_self_compare': thread.c:(.text+0x25): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_get_self': thread.c:(.text+0x98): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_join': thread.c:(.text+0xc9): undefined reference to `pthread_join' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(thread.o): In function `opal_thread_start': thread.c:(.text+0xf5): undefined reference to `pthread_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_get_hostname': net.c:(.text+0x110): undefined reference to `pthread_getspecific' net.c:(.text+0x1b2): undefined reference to `pthread_setspecific' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(net.o): In function `opal_net_init': net.c:(.text+0x1eb): undefined reference to `pthread_key_create' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all2': malloc.c:(.text+0xcf): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_unlock_all': malloc.c:(.text+0x55f): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `arena_get2': malloc.c:(.text+0x9cb): undefined reference to `pthread_self' malloc.c:(.text+0xb11): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_lock_all': malloc.c:(.text+0xc94): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o):malloc.c:(.text+0x1969): more undefined references to `pthread_self' follow /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `ptmalloc_init': malloc.c:(.text+0x5191): undefined reference to `pthread_atfork' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_pvalloc': malloc.c:(.text+0x5f86): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(lt1-malloc.o): In function `opal_memory_ptmalloc2_valloc': malloc.c:(.text+0x6186): undefined reference to `pthread_self' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_finalize': plpa_runtime.c:(.text+0x18): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x31): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x4b): undefined reference to `pthread_mutex_destroy' /home/software/rhel5/openmpi-1.3.2/nag-5.1/lib/libopen-pal.a(plpa_runtime.o): In function `opal_paffinity_linux_plpa_init': plpa_runtime.c:(.text+0x74): undefined reference to `pthread_mutex_lock' plpa_runtime.c:(.text+0x85): undefined reference to `pthread_mutex_unlock' plpa_runtime.c:(.text+0x98): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x42): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x52): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x94): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0xad): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_open_device@@IBVERBS_1.1': (.text+0x290): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x36f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_get_device_list@@IBVERBS_1.1': (.text+0x3c9): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-device.o): In function `ibv_ack_async_event@@IBVERBS_1.1': (.text+0x68): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x546): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x639): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-memory.o): In function `ibv_madvise_range': (.text+0x779): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x478): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_qp@@IBVERBS_1.1': (.text+0x483): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x4f5): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_srq@@IBVERBS_1.1': (.text+0x500): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x541): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x551): undefined reference to `pthread_cond_signal' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x596): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_cq@@IBVERBS_1.1': (.text+0x5bc): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x62c): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x670): undefined reference to `pthread_mutex_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x67b): undefined reference to `pthread_cond_init' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_cq@@IBVERBS_1.1': (.text+0x683): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x739): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x763): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_destroy_comp_channel': (.text+0x788): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_create_comp_channel': (.text+0x7b6): undefined reference to `pthread_mutex_trylock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/libibverbs.a(src_libibverbs_la-verbs.o): In function `ibv_ack_cq_events@@IBVERBS_1.1': (.text+0x56b): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10bc): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__deregister_frame_info_bases': (.text+0x10cd): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x117f): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1238): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14b6): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `_Unwind_Find_FDE': (.text+0x14c7): undefined reference to `pthread_mutex_lock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_table_bases': (.text+0x119e): undefined reference to `pthread_mutex_unlock' /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgcc_eh.a(unwind-dw2-fde-glibc.o): In function `__register_frame_info_bases': (.text+0x1257): undefined reference to `pthread_mutex_unlock' collect2: ld returned 1 exit status make[4]: *** [SWMFEXE] Error 1 make[4]: Leaving directory `/nobackup/gtoth/Tmp/SWMF/CON/Control/src' make[3]: *** [SWMF] Error 2 make[3]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[2]: *** [test4_compile] Error 2 make[2]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make[1]: *** [test4] Error 2 make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF' make: [test] Error 2 (ignored) make[1]: Entering directory `/nobackup/gtoth/Tmp/SWMF' -rw-r--r-- 1 gtoth aoss 26 Sep 13 20:31 GM/BATSRUS/test_shocktube.diff -rw-r--r-- 1 gtoth aoss 24 Sep 13 20:34 GM/BATSRUS/test_hallmhd.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 20:36 GM/BATSRUS/test_multifluid.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:39 GM/BATSRUS/test_multiion.diff -rw-r--r-- 1 gtoth aoss 24 Sep 13 20:41 GM/BATSRUS/test_mhdions.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 20:43 GM/BATSRUS/test_mhdnoncons.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 20:46 GM/BATSRUS/test_eosgodunov.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:48 GM/BATSRUS/test_levelset.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:51 GM/BATSRUS/test_hyades2d.diff -rw-r--r-- 1 gtoth aoss 30 Sep 13 20:54 GM/BATSRUS/test_graydiffusion.diff -rw-r--r-- 1 gtoth aoss 23 Sep 13 20:56 GM/BATSRUS/test_corona.diff -rw-r--r-- 1 gtoth aoss 26 Sep 13 20:59 GM/BATSRUS/test_coronasph.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 20:59 GM/BATSRUS/test_earthsph.diff -rw-r--r-- 1 gtoth aoss 26 Sep 13 21:02 GM/BATSRUS/test_2bodyplot.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:02 GM/BATSRUS/test_titan.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 21:05 GM/BATSRUS/test_titan_restart.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:05 GM/BATSRUS/test_mars.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:07 GM/BATSRUS/test_venus.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 21:09 GM/BATSRUS/test_venus_restart.diff -rw-r--r-- 1 gtoth aoss 23 Sep 13 21:09 GM/BATSRUS/test_saturn.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:11 GM/BATSRUS/test_comet.diff -rw-r--r-- 1 gtoth aoss 29 Sep 13 21:15 GM/BATSRUS/test_magnetometer.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:17 GM/BATSRUS/test_func.diff -rw-r--r-- 1 gtoth aoss 16 Sep 13 21:20 IM/HEIDI/test.diff -rw-r--r-- 1 gtoth aoss 28 Sep 13 21:20 IE/RIM/notest.diff -rw-r--r-- 1 gtoth aoss 36 Sep 13 21:20 IE/Ridley_serial/notest.diff -rw-r--r-- 1 gtoth aoss 12 Sep 13 21:21 PW/PWOM/test_Saturn_plots.diff -rw-r--r-- 1 gtoth aoss 16 Sep 13 21:21 PW/PWOM/test_Saturn.diff -rw-r--r-- 1 gtoth aoss 28 Sep 13 21:21 PS/DGCPM/notest.diff -rw-r--r-- 1 gtoth aoss 25 Sep 13 21:21 IM/RCM/notest.diff -rw-r--r-- 1 gtoth aoss 26 Sep 13 21:21 IM/RCM2/notest.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:21 PW/PWOM/test_Saturn_restart.diff -rw-r--r-- 1 gtoth aoss 12 Sep 13 21:21 PW/PWOM/test_Earth_plots.diff -rw-r--r-- 1 gtoth aoss 16 Sep 13 21:21 PW/PWOM/test_Earth.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:22 PW/PWOM/test_Earth_restart.diff -rw-r--r-- 1 gtoth aoss 0 Sep 13 21:26 RB/RBE/test.diff -rw-r--r-- 1 gtoth aoss 27 Sep 13 21:27 UA/GITM/notest.diff -rw-r--r-- 1 gtoth aoss 22 Sep 13 21:27 UA/GITM2/test_earth.diff -rw-r--r-- 1 gtoth aoss 33 Sep 13 21:27 RB/RiceV5/notest.diff -rw-r--r-- 1 gtoth aoss 28 Sep 13 21:27 RB/Rice/notest.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:28 UA/GITM2/test_mars.diff -rw-r--r-- 1 gtoth aoss 31 Sep 13 21:29 test_pw.diff -rw-r--r-- 1 gtoth aoss 31 Sep 13 21:30 test_rb.diff -rw-r--r-- 1 gtoth aoss 21 Sep 13 21:33 test_esmf.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:35 test1_pw.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:35 test1_ie.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:35 test1_gm.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:36 test2_sc.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:36 test2_ih.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:43 test3_im.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:43 test3_ie.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:43 test3_gm.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:44 test4_im.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:44 test4_ie.diff -rw-r--r-- 1 gtoth aoss 17 Sep 13 21:44 test4_gm.diff See test_swmf.res and test_swmf.log for more detail... cat: GM/BATSRUS/test_func.speed: No such file or directory make[1]: [test_check] Error 1 (ignored) make[1]: Leaving directory `/nobackup/gtoth/Tmp/SWMF'